Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci193g0001 ATGTCTATCACCATTTTCATGCTGTGTTTGTTCCTGAACATAGCATATTCAGACAAGAACATGAATAATGTTGGATTCACTTATGATGGACACTTCAAGATGGGCGATCAAGAGCTCAAGCATTCCAATCTGACAGCCAAAGTAATACGTACCGATGGTGGTAGAAGTGAAGCTTGGCAAGTCTTCTACAATCTTCCTCTTCAATTCAAGAATTCCAATACCTCTCCTTCTATCTTCTCCTTCTCTACCACTTTCATCTTTGCAATAGTAGCCACCAATCCTGAATTTCACGGCCACGGACTCGCCTTGGCTATCTCACCTACTAGAGGTATTCCTCAAGCTCTGCCAAACCAGTATCTTGGCCTATTCAATGCTACCAACAATGGTGAAAGTTATAATCATATTGTCGCAATAGAGCTTGACACTGACGAGGATTTTCAGTTTCATGATATTGATGATAATCATCTTGGAATTGATATCAATGGGTTGGTCTCTGTCAATAGTTCTCCTGCAGGATACTATACTGATCGTGGTCATCTCAGAAAGCTAGGTCTTACACGTGGAGAACCGATGCAAGTTTGGGTTGAATATGACAGTGAAGATCAGAAGCTCAGTGTCACAATTCATCCCATAAACATACCTAAACCTGAGATTCCTCTTCTCACACTGATGACAAGAGATCTTTCTTCTAATTTCTCTGAATTTATGTATGTTGGGTTCTCATCCTCCAGCGGGTCATATTCATCTCATTACAGACTGGGTTGGAGTTTCCAGATGAACGGTCAACCTAAGGAGATTAATCTTTCTCGCCTTCCTGACATTCCTGGGATTTTAGATCCAAATGAAAGCGATGGAGGAGGGAAAGGATACAAGAAAGTTTTGATAGTTATATCACCACTACTAGTGGGTGTGGTTTTCCTTCTAATCTTGATTTATGGAGCGATCATGATCTCGAGGAGGAGAAAATTCATTCAAGTTCTTGAAGATTGGCAAGTCTTGTATGGGCCTCATATGTTCACGTACAAAGACTTGTTCATTGCAACAAAAGGGTTTAGAGATGGACAACTTCTTGGCAGAGGAGGTTTTGGAAGAGTATACAAGGGGACTCTACCATTTTCCAATGTTCAAATTGCAGTGAAAAGAGTTTCTCATGATTCAAGACAAGGAATGAAAGAATTCATAGCAGAAATCGCAACCATCGGCCGTCTCAGGCATCCAAACTTGGTAAGACTTCTTGGCTATTGCAGAAGAAAAAAAGAACTCCTCTTAATTTATGACTACATGCCCAATGGAAGCCTAGACAAGTTCCTCTACCGCATTCCAAACAGCATACTCAGCTGGAAACAAAGATTCAAGATCATAAAAGATGTGGCATCTGGACTCTTGTATCTTCACCAGCAATGGGTTCAAGTCATCGTCCACAGAGACATCAAACCAGCCAATGTTCTGATTGACAATGACATGAATGGTAGACTGGGAGATTTCGGCCTTGCCAAGCTATGGGACCATGGAAATGATCCTCAAACATCTCATGTAGCAGGAACTCCGGGCTACATAGACCCTGAAAATGTGCAGAGTGGAAAATCAAGCACATGTACTGATATATATTCATTTGGGGTGTTTCTGTTGGAGGTTGTTTGCGGTAGAAGGCCGATCGAAACGCAAACCTCGCCGGAGAAAGTATTGCTGGTAGAATGGGTTATGGTGTGTTTGGATGAGGGAGACATGTGTGAAGCAGTGGACAGCAGATTGGGGGATGAATATGTGGTGGAAGAAGCTGAATTGGTGCTCAAACTTGGGTTGCTGTGTTCACACCCTGTTGCTTCAGCTAGGCCTACGATTTCTACTATTGTGGAAATTTTGGATGGAGATTCTCAGTTTCCTGATAATTTATCAGACTTAATCAAGTTTAGAAATTTTGGTGGCTGGTCTGGTCAAGGATCTTCATCATCCTCTACTTTTCCCACTGGGCAGACTTCTATTGCTTCTATCACTTTCACAGAACCATTTGCCTCCAGGGGCCGCTAG 2028 0.4221 MSITIFMLCLFLNIAYSDKNMNNVGFTYDGHFKMGDQELKHSNLTAKVIRTDGGRSEAWQVFYNLPLQFKNSNTSPSIFSFSTTFIFAIVATNPEFHGHGLALAISPTRGIPQALPNQYLGLFNATNNGESYNHIVAIELDTDEDFQFHDIDDNHLGIDINGLVSVNSSPAGYYTDRGHLRKLGLTRGEPMQVWVEYDSEDQKLSVTIHPINIPKPEIPLLTLMTRDLSSNFSEFMYVGFSSSSGSYSSHYRLGWSFQMNGQPKEINLSRLPDIPGILDPNESDGGGKGYKKVLIVISPLLVGVVFLLILIYGAIMISRRRKFIQVLEDWQVLYGPHMFTYKDLFIATKGFRDGQLLGRGGFGRVYKGTLPFSNVQIAVKRVSHDSRQGMKEFIAEIATIGRLRHPNLVRLLGYCRRKKELLLIYDYMPNGSLDKFLYRIPNSILSWKQRFKIIKDVASGLLYLHQQWVQVIVHRDIKPANVLIDNDMNGRLGDFGLAKLWDHGNDPQTSHVAGTPGYIDPENVQSGKSSTCTDIYSFGVFLLEVVCGRRPIETQTSPEKVLLVEWVMVCLDEGDMCEAVDSRLGDEYVVEEAELVLKLGLLCSHPVASARPTISTIVEILDGDSQFPDNLSDLIKFRNFGGWSGQGSSSSSTFPTGQTSIASITFTEPFASRGR 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci193g0001 675 SMART serkin_6 351 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci193g0001 675 CDD STKc_IRAK 357 623 - -
Prci193g0001 675 Gene3D Phosphorylase Kinase; domain 1 337 427 - -
Prci193g0001 675 SUPERFAMILY Protein kinase-like (PK-like) 333 624 IPR011009 -
Prci193g0001 675 CDD lectin_legume_LecRK_Arcelin_ConA 26 261 IPR001220 GO:0030246
Prci193g0001 675 Pfam Protein kinase domain 352 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci193g0001 675 FunFam Lectin-domain containing receptor kinase A4.3 336 427 - -
Prci193g0001 675 SUPERFAMILY Concanavalin A-like lectins/glucanases 8 264 IPR013320 -
Prci193g0001 675 FunFam L-type lectin-domain containing receptor kinase S.4 428 634 - -
Prci193g0001 675 Gene3D - 13 272 - -
Prci193g0001 675 ProSitePatterns Serine/Threonine protein kinases active-site signature. 472 484 IPR008271 GO:0004672|GO:0006468
Prci193g0001 675 ProSitePatterns Protein kinases ATP-binding region signature. 357 380 IPR017441 GO:0005524
Prci193g0001 675 PANTHER - 46 625 - -
Prci193g0001 675 Pfam Legume lectin domain 26 271 IPR001220 GO:0030246
Prci193g0001 675 Gene3D Transferase(Phosphotransferase) domain 1 428 635 - -
Prci193g0001 675 ProSiteProfiles Protein kinase domain profile. 351 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci193g0001 60 675 Receptor kinase-like Gene Family AT4G29050 56.752 0.0 714
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Prci193g0001 Pkinase 5.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci193g0001 - - pcin:129301411 1172.53