Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1931g0005 ATGGTGATATCTCAATTTCATTCATTCTCTTCAATGTCTTCACGTCCACCTTTTGCGAGATTAACAAGGCACCTTGTTCACGGGACCACGCGCTTTAGCCTTCGCCACCGCCTCCTTCGTTTTCCTCATAACTACAAATTTTCATTCTTTTTTCTTTTTACTGTTCCCATCTTGCTCTCGCTCTATGCTTCGCCTCCTTCCTCAACCTTCAACCTCTCTCTCTCTCTGTGTCTCTCTCTCAATGAAGAACAAGAAGCGTGCAACTCACCAATGACAAAGCTACCCTCGTCTCTTGTTCCTATACCCTTCATCTTGGTCTCCATCATCATCTTCTTCCTTTCTCTGCTCTCTCCAACCGCCGTCACTAGCCTCGGCTCTGCCTCCACCGCTGCCGTAGTCTACGGAACTGGCACCTTCTGCGGCATTGTTGCTGGCGAACCCACTCAGAGAATCCTATGCTATCAAAATGATCAGACTCTCCCAGTCCTTCCCAATTTCTCCTTCCAAGCCGTCTCCGGTGGCCGGAGCTTCTTCTGCGGTCTCCTCTCCGGTGGGCTCACCCTCCTTTGTTGGGACACTGCAGATTCATACATTCCCTTTCAGCCGAGACGCTTATATTACAGCGCCACCGTCTCATTGACTGATCTAACAGTTGGAGATACTCAGGTTTGTGCCAGGGAGTTGAACACTGGGACAGTGAGATGCTGGAGAGGAAAAGACGGAAATGGACATGAGTTTCCTTCTCCTAATGAGGACCTTAATTTTCGTGGGGTTACGTCTGGATGTGGGTTTACTTGCGGGATTCTGAAGGGAAACAACAGTGTTCATTGTTGGGGTCAGAGAGAGAGTATTAGAAATGAGATCCAGAGACAGTTTAGGAATCTCTCGATGTCAAGCCTAGTTGCAGGAGAATCCCATGTTTGTGGTTTGACCACCGATGGAGTTTTGGTCTGTAAAGGAAGCTATAACACTGGTCAATTGAACGTTCCTTTCAGTTCACCTTCAGAATTCTCGAGTCTTGCCTTAGGAGGGAACTTCACTTGTGCTATCAGAAGCAGGAATGGTCTTGTTATGTGCTGGGGAGGAATCAACAGGTCTGAGATCGAGAGTGACATGATCCAAAATGTTTCTTTCGAGTCAATTATTGCTGGTTTGGATTATGTTTGTGGGTTAATGACAGGGAATTTGTCTGTGATCTGCTGGGGACCGGGTTGGTCTAGAAGAAGGCTTAATAACTCTCACAGAGCAGATCTTCTTCTTCCTCTGGGAATGATAATCCCAGGTCCATGCGTTAAGGATTCTTGTAGCTCTTGTGGTACATATCCTAACTCCGAGGTTCTCTGTTATGGTTCTGGAAGAATATGTTATTCCTGCCAAACAGAGAATCCAATCGCAGTGCCATTACCAATCCCGCCCCAACCATCGCCATCTTCACCAAATTCCTCAGCCCCACCTGCTGGAATAAGAAACACAAGAGAAAGGTTAATATTTTTGGTTCTTGGATCAGCCGGTGCTTTTGTGGGTCTCTGCTCAGTCCTTTTCTGCTTGTGGTTTGGAACATGTCGTTTATTATTGCAGAGAAAGTCTGAACATTTAGCTCCAGCCACAACCACCGAAGAAGCCGATGTAGATATTACTTTTCCCGCTGGTTCAACCACAGACACAACCATAAGATCATTCTCCAGCAAACGACAGAATTCACGGACATTAAGGAGCTACAGAAGAAGTGGGTCATCCTCCATTGTAGACAAGATGGAGACCTTCACGTTATCAGAGCTCGCAGCAACCACAAACAACTTCTCCGTGGACAACAAAATAGGCTCCGGAAGCTTCGGCGTTGTGTACAGAGGCAAGCTAGAAGATGGACGGGAAGTAGCCATCAAGCGAGGAGAAACCTGCAGGAGAAAGAAGAAATTCCAAGAAAAAGAAAGCGCATTCGATTCTGAAGTGGCTTTATTATCTAGGCTTCATCACAAACACCTGGTGGGCCTCATTGGTTTCTGCGAGGAAAACGACGAGAGACTCTTGGTCTACGAATACATGACCAACGGATCACTCCACGATCACTTACACAACAAGCACAACACTGAAAGAGCCAGCAGTGTCATAAATTCATGGCAAATGAGGATCAAAATTGCACTAGACGCTGCCAGAGGGATCGAATATCTTCACAACTACGCAGTGCCCTCGATAATTCACAGGGACATCAAGTCATCAAACATACTGTTAGACTCAAATTGGAACGCCAGAGTCTCCGATTTCGGATTATCATTGATGGGCGAGCAAGAACATAAATCGACAAAAGCTGTAGGAACAGTAGGGTACATAGATCCAGAGTACTACGTGATGAACGTTTTGACTACAAAAAGTGATGTTTATGGATTAGGGGTGGTTATGTTGGAGCTTTTGACGGGTAAAAGAGCAGTGTTCAGAGACGAAGATGGAGGGTCAAGTCCTGTCGGTGTGGTGGAGTACGCAGGACCGAGGATCGGAGGAGGAGAGTTATGGAGCGTGCTGGATTACAGAGTCGGAGAACCGGAGGTGAACGAAGTAGAAGGTTTGGAGATAATGGCGTATAGTGCGATGCACTGTGTGAATTTGGAGGCGAAGGAGAGACCGAGTGTGAGTGATGTAGTGGCGAACCTGGAGAGAGCTTTGGCTGTCGTTCAAGGAAGCCCTGGTAGTGGCTCCATTACAGCATTCTCTTCCTCTGCTCCATTCGATGAACGCAAGACAACAACATGGCGGGACGATGAAATCTGA 2763 0.4694 MVISQFHSFSSMSSRPPFARLTRHLVHGTTRFSLRHRLLRFPHNYKFSFFFLFTVPILLSLYASPPSSTFNLSLSLCLSLNEEQEACNSPMTKLPSSLVPIPFILVSIIIFFLSLLSPTAVTSLGSASTAAVVYGTGTFCGIVAGEPTQRILCYQNDQTLPVLPNFSFQAVSGGRSFFCGLLSGGLTLLCWDTADSYIPFQPRRLYYSATVSLTDLTVGDTQVCARELNTGTVRCWRGKDGNGHEFPSPNEDLNFRGVTSGCGFTCGILKGNNSVHCWGQRESIRNEIQRQFRNLSMSSLVAGESHVCGLTTDGVLVCKGSYNTGQLNVPFSSPSEFSSLALGGNFTCAIRSRNGLVMCWGGINRSEIESDMIQNVSFESIIAGLDYVCGLMTGNLSVICWGPGWSRRRLNNSHRADLLLPLGMIIPGPCVKDSCSSCGTYPNSEVLCYGSGRICYSCQTENPIAVPLPIPPQPSPSSPNSSAPPAGIRNTRERLIFLVLGSAGAFVGLCSVLFCLWFGTCRLLLQRKSEHLAPATTTEEADVDITFPAGSTTDTTIRSFSSKRQNSRTLRSYRRSGSSSIVDKMETFTLSELAATTNNFSVDNKIGSGSFGVVYRGKLEDGREVAIKRGETCRRKKKFQEKESAFDSEVALLSRLHHKHLVGLIGFCEENDERLLVYEYMTNGSLHDHLHNKHNTERASSVINSWQMRIKIALDAARGIEYLHNYAVPSIIHRDIKSSNILLDSNWNARVSDFGLSLMGEQEHKSTKAVGTVGYIDPEYYVMNVLTTKSDVYGLGVVMLELLTGKRAVFRDEDGGSSPVGVVEYAGPRIGGGELWSVLDYRVGEPEVNEVEGLEIMAYSAMHCVNLEAKERPSVSDVVANLERALAVVQGSPGSGSITAFSSSAPFDERKTTTWRDDEI 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1931g0005 920 ProSitePatterns Protein kinases ATP-binding region signature. 606 628 IPR017441 GO:0005524
Prci1931g0005 920 FunFam receptor-like serine/threonine-protein kinase NCRK 574 680 - -
Prci1931g0005 920 MobiDBLite consensus disorder prediction 899 920 - -
Prci1931g0005 920 SUPERFAMILY Protein kinase-like (PK-like) 577 882 IPR011009 -
Prci1931g0005 920 Gene3D Phosphorylase Kinase; domain 1 560 680 - -
Prci1931g0005 920 ProSiteProfiles Protein kinase domain profile. 600 886 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1931g0005 920 SUPERFAMILY RCC1/BLIP-II 210 453 IPR009091 -
Prci1931g0005 920 Gene3D Transferase(Phosphotransferase) domain 1 681 891 - -
Prci1931g0005 920 CDD STKc_IRAK 606 884 - -
Prci1931g0005 920 SMART serkin_6 600 886 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1931g0005 920 Gene3D - 297 467 IPR009091 -
Prci1931g0005 920 Gene3D - 114 296 IPR009091 -
Prci1931g0005 920 Pfam Protein kinase domain 601 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1931g0005 920 ProSitePatterns Serine/Threonine protein kinases active-site signature. 731 743 IPR008271 GO:0004672|GO:0006468
Prci1931g0005 920 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 294 897 IPR044815 GO:0004674
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1931g0005 104 895 Receptor kinase-like Gene Family AT3G55950 52.264 0.0 728
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Prci1931g0005 Pkinase 1.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1931g0005 - - pcin:129301163 1744.17