Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1904g0002 ATGAAGCATCGATCATCATCAACATTATACAGCGTAGCCAAAGCTGCTATGGAAGGTCATAGGTTAGTAGTGGTGATGTCCTTGCTCGTGCTGCTCACATGTGGAAGCTGTTCAGCTCAGCTGAGAAAGGGCTTCTACAGCAAAACATGCCCTAATCTTGAAAAATCTGTTCGTTCTGCTGTTTCACGCAAGTTCCAGCAGACCTTCGTTACTGCTCCCGCCACTCTCAGACTCTTCTTCCACGACTGCTTCGTCCGGGGATGCGACGCATCGGTGATACTGGGGCATAAGAACGCAGAGAAGGATCATCCAGATGATGTGTCACTTGCCGGAGATGGCTTCGACACGGTGGTGAAAGCCAAAGCCGCCGTTGACAGTGATCCACAGTGCCGCAACAAGGTCTCTTGTGCTGACATTCTCGCGCTCGCTACTAGGGATGTCGTCAACTTGGCAGGTGGACCTTTCTATGAAGTAGAACTGGGAAGGCGCGATGGCAGAATATCCACCATAGCCAGTGTTCAACGTCGTCTTCCTCAGCCATTCCACAATTTGAATCAGCTTAACTCTCTCTTCTCCATGCATGGCCTCTCTCAGACCGATCTCATCGCCTTATCAGGAGCACACACGATAGGGTTTTCTCACTGCAATCGCTTCTCCAACAGGATCTACAACTTCAGCCCCAGAAGCAGAATCGACCCGTCCTTGAATCTTCAGTACGCTTTTCAACTCAGAAACATGTGTCCCTTGAAGGTTGATCCTAGGATCGCCATCAACATGGACCCTGTTACTCCCCAGAAGTTTGATAACCAGTACTTCAAGAATCTCCAGAATGGCATGGGTCTGTTCACTTCTGATCAAGTTCTCTTCACTGATAATAGGTCTAAGGCCACTGTTAATTTGTTTGCTTCTAGTGAAGCTGCTTTCAATTCTGCTTTTGTTTCTGCTATTACCAAGTTGGGAAGGGTTCATGTTAAAACTGGGAATGATGGTGAAATTAGGGTTGATTGCACTAGAATCAACTAG 1023 0.477 MKHRSSSTLYSVAKAAMEGHRLVVVMSLLVLLTCGSCSAQLRKGFYSKTCPNLEKSVRSAVSRKFQQTFVTAPATLRLFFHDCFVRGCDASVILGHKNAEKDHPDDVSLAGDGFDTVVKAKAAVDSDPQCRNKVSCADILALATRDVVNLAGGPFYEVELGRRDGRISTIASVQRRLPQPFHNLNQLNSLFSMHGLSQTDLIALSGAHTIGFSHCNRFSNRIYNFSPRSRIDPSLNLQYAFQLRNMCPLKVDPRIAINMDPVTPQKFDNQYFKNLQNGMGLFTSDQVLFTDNRSKATVNLFASSEAAFNSAFVSAITKLGRVHVKTGNDGEIRVDCTRIN 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1904g0002 340 PRINTS Haem peroxidase superfamily signature 152 164 IPR002016 GO:0004601|GO:0006979|GO:0020037
Prci1904g0002 340 PRINTS Haem peroxidase superfamily signature 260 275 IPR002016 GO:0004601|GO:0006979|GO:0020037
Prci1904g0002 340 PRINTS Haem peroxidase superfamily signature 72 86 IPR002016 GO:0004601|GO:0006979|GO:0020037
Prci1904g0002 340 PRINTS Haem peroxidase superfamily signature 134 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Prci1904g0002 340 PRINTS Haem peroxidase superfamily signature 200 215 IPR002016 GO:0004601|GO:0006979|GO:0020037
Prci1904g0002 340 ProSitePatterns Peroxidases proximal heme-ligand signature. 200 210 IPR019793 -
Prci1904g0002 340 ProSiteProfiles Plant heme peroxidase family profile. 40 340 IPR002016 GO:0004601|GO:0006979|GO:0020037
Prci1904g0002 340 PANTHER - 22 340 IPR000823 GO:0004601|GO:0006979|GO:0020037
Prci1904g0002 340 FunFam Peroxidase 44 183 - -
Prci1904g0002 340 Pfam Peroxidase 57 304 IPR002016 GO:0004601|GO:0006979|GO:0020037
Prci1904g0002 340 ProSitePatterns Peroxidases active site signature. 72 83 IPR019794 GO:0004601
Prci1904g0002 340 Gene3D Peroxidase, domain 2 178 319 - -
Prci1904g0002 340 FunFam Peroxidase 178 319 - -
Prci1904g0002 340 SUPERFAMILY Heme-dependent peroxidases 40 340 IPR010255 GO:0004601|GO:0006979|GO:0020037
Prci1904g0002 340 PRINTS Plant peroxidase signature 314 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Prci1904g0002 340 PRINTS Plant peroxidase signature 133 143 IPR000823 GO:0004601|GO:0006979|GO:0020037
Prci1904g0002 340 PRINTS Plant peroxidase signature 152 167 IPR000823 GO:0004601|GO:0006979|GO:0020037
Prci1904g0002 340 PRINTS Plant peroxidase signature 199 211 IPR000823 GO:0004601|GO:0006979|GO:0020037
Prci1904g0002 340 PRINTS Plant peroxidase signature 258 273 IPR000823 GO:0004601|GO:0006979|GO:0020037
Prci1904g0002 340 PRINTS Plant peroxidase signature 50 69 IPR000823 GO:0004601|GO:0006979|GO:0020037
Prci1904g0002 340 PRINTS Plant peroxidase signature 274 291 IPR000823 GO:0004601|GO:0006979|GO:0020037
Prci1904g0002 340 PRINTS Plant peroxidase signature 74 94 IPR000823 GO:0004601|GO:0006979|GO:0020037
Prci1904g0002 340 PRINTS Plant peroxidase signature 112 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Prci1904g0002 340 CDD secretory_peroxidase 40 339 IPR033905 GO:0004601|GO:0042744
Prci1904g0002 340 Gene3D - 44 340 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1904g0002 17 340 Peroxidase AT2G18980 70.988 5.71e-174 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1904g0002 K00430 - gmx:100804620 523.857