Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci186g0008 ATGATGTTTGTTGATAATGGACTTTCTGCCGGAATGGGTTTAGACTTTGGGTGGCAACAGAGATATGCCCGCTTCTGTGGAAGAGTAGTGGTCCTTTCAATACTTGCTTTGCTTCTATATCCATTTCTCTGGGCTTGGACTATCATTGGTACATTGTGGTTCACTAGTGCCAGGAACTGCTTGCCTGAAGAAGGTCAGAAATGGGGCTTCCTCATCTGGTTACTTTTCAGCTACTGTGGACTACTTTGCGTTGCTTGCATGTCATTAGGCAAGTGGTTGGCCCGAAGACAAGCACATTTGTTACGTGCCCAGCAGGGTATTCCTGTGTCTGAATATGGAGTTCTGGTGGACATGATCCGAGTGCCTGATTGGGCATTTGAAGCTGCTGGTCAGGAAACAAGGGGTATGGGCCAAGATGCTGGCGCATATCATCCTGGTCTATACCTAACCCCAGCTCAGAGAGAAGCAGTTGAAGCTTTAATTCAGGAACTCCCAAAGTTCAGGTTGAAGGCTGTTCCAACTGACTGTAGTGAATGCCCCATCTGCTTAGAAGAATTCCACGAGGGGAATGAGGTCCGTGGCCTGCCTTGCGCTCATAATTTTCATGTTGAATGCATTGATGAGTGGCTTCGCCTTAATGTAAAATGTCCTCGGTGCCGCTGTTCAGTATTTCCAAATCTTGACCTTAGTGCTCTGTCCAATCTCCGTCCTGAATCAGAACGATCTTCTGCCAGTGTTGTGACGACAACAAGATATGTGAGAGGTCAACCCTCTAGTCAGAGTTATTTGTTGAGATTACAGGGTCTGCTCCGCCCAGTGCGTTCAGAAATCGCTGGGCCGGGTGGTGAGGTGCGTAATACTTCAGAAAATGCAGAGAATGGTAGTGTGCCTGTCGTAACACGAAATGCATCAATTGGAGACCAAGGCCGTTCAGTCGAATGCATGCCTGTCAGTCTCTCCTCTGCACCAAACTAG 975 0.479 MMFVDNGLSAGMGLDFGWQQRYARFCGRVVVLSILALLLYPFLWAWTIIGTLWFTSARNCLPEEGQKWGFLIWLLFSYCGLLCVACMSLGKWLARRQAHLLRAQQGIPVSEYGVLVDMIRVPDWAFEAAGQETRGMGQDAGAYHPGLYLTPAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHEGNEVRGLPCAHNFHVECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRPESERSSASVVTTTRYVRGQPSSQSYLLRLQGLLRPVRSEIAGPGGEVRNTSENAENGSVPVVTRNASIGDQGRSVECMPVSLSSAPN 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci186g0008 324 ProSiteProfiles Zinc finger RING-type profile. 179 220 IPR001841 -
Prci186g0008 324 SUPERFAMILY RING/U-box 161 228 - -
Prci186g0008 324 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 148 225 IPR013083 -
Prci186g0008 324 Pfam Ring finger domain 178 220 IPR001841 -
Prci186g0008 324 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SIS3 1 303 IPR044793 GO:0004842|GO:0010182
Prci186g0008 324 SMART ring_2 179 219 IPR001841 -
Prci186g0008 324 FunFam E3 ubiquitin-protein ligase SIS3 147 225 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci186g0008 2 304 C3H Transcription Factor Family AT3G47990 72.876 1.10e-160 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci186g0008 K16284 - gmx:100812016 600.512