Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci186g0001 ATGGAAGGTAGGCATGAATATAAGAAGGGGCTGTGGAATTCCCAGGAAGACAAGATTTTAATGGAGCACGTGAAGCAGCACGGGGTAGGGAAGTGGAATCGTATTGCTAAAGCCACTGGGTTGAAGAGATGTGGCAAAAGTTGCAGACTGAGGTGGATGAACTATCTGAGTCCGAACGTGAAGCGTGGAGATTTCTCCGAAGAAGAAGACGACCTCATCATTCGCCTCCACAATCTCCTTGGAAATAGATGGTCATTGATAGCAGGGAGGGTGCCAGGAAGGACAGACAACCAAGTGAAGAACTACTGGAACACTCATTTGAGCAAAAAGTTGGGTGTTAATAAGAAGGAAAAGATCAAAACTTGTCAACATTCAAAGTCACCCTCTACCAAATCAAATGATATGGCTCTTAACATCAAGTCAAATCCTTACAAGGAAATTTTAAATTGCAGTGAAAATAGTGAAACTAGAAAGTTTCTACAAGATAATTCTTTGCAGGAGATGATTATAATTGATGATTTTGAGACCAACTTCTTATTTGCTGGCAATGGAATTGGCTTTTATGGTCCTTCCTCCTCCATTGAGCCTTTCCAAGACTACTTTGTTGACCCTTACCCTGATTGGGCTGCCTTGTAA 636 0.4182 MEGRHEYKKGLWNSQEDKILMEHVKQHGVGKWNRIAKATGLKRCGKSCRLRWMNYLSPNVKRGDFSEEEDDLIIRLHNLLGNRWSLIAGRVPGRTDNQVKNYWNTHLSKKLGVNKKEKIKTCQHSKSPSTKSNDMALNIKSNPYKEILNCSENSETRKFLQDNSLQEMIIIDDFETNFLFAGNGIGFYGPSSSIEPFQDYFVDPYPDWAAL 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci186g0001 211 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 6 149 - -
Prci186g0001 211 SMART sant 8 58 IPR001005 -
Prci186g0001 211 SMART sant 61 109 IPR001005 -
Prci186g0001 211 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 4 56 IPR017930 -
Prci186g0001 211 Gene3D - 64 139 - -
Prci186g0001 211 FunFam MYB-related transcription factor 8 61 - -
Prci186g0001 211 FunFam Transcription factor WER 63 134 - -
Prci186g0001 211 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 57 111 IPR017930 -
Prci186g0001 211 Gene3D - 9 61 - -
Prci186g0001 211 CDD SANT 12 56 IPR001005 -
Prci186g0001 211 ProSiteProfiles Myb-like domain profile. 57 107 IPR001005 -
Prci186g0001 211 CDD SANT 65 107 IPR001005 -
Prci186g0001 211 SUPERFAMILY Homeodomain-like 7 103 IPR009057 -
Prci186g0001 211 Pfam Myb-like DNA-binding domain 9 56 IPR001005 -
Prci186g0001 211 Pfam Myb-like DNA-binding domain 62 107 IPR001005 -
Prci186g0001 211 ProSiteProfiles Myb-like domain profile. 4 56 IPR001005 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci186g0001 5 157 MYB Transcription Factor Family AT5G40330 64.286 2.31e-66 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci186g0001 Myb_DNA-binding 1.3e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci186g0001 K09422 - qsu:112034662 227.254