Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Prci1866g0001 | ATGAAGAGGAAGGTCTATTTCCCTCTTCTCATTGCCTTCTTCTTAGGCATACTCTCTCTCGCCGTCACTGCCGATGTCCCCATTACCAGCCATGGAGCCCTCACCGACGCCGAAGCCTTGTACATCAGGCAACGTCAGCTTCTTTACTACAGAGACGAGTTCGGCGACAGAGGAGAACATGTTACCGTCGACCCTTCCCTGGTCTTCGAGAACAATCGCATTAGAAATGCTTATATAGCTTTACGAGCTTGGAAGCAAGCGATTCTTTCGGATCCGAATAATTGCACGCTCAATTGGGTTGGACCAAATGTGTGTAACTACAGTAATGTTTTCTGTGCTTCGGCACTGGATAACCCTAAGGTTCGTACTGTCGCTGGCATTGATCTCAACCACTGTGACATTGCTGGGTACTTGCCGGAAGAGCTTGGATTGCTCGCGGATCTTGCTCTCCTCCACATCAACTCCAACAGGTTTTGTGGTACTGTTCCTCACAAGTTTGATAGACTGAAACTCCTGTTTGAACTGGATCTCAGTAACAATAGGTTCGCCGGGAAGTTCCCCACGGTGGTTCTGAGGCTTCCCGCGCTCAAGTTCTTGGATCTGAGATTTAATGAATTTGAAGGGACAGTGCCTAGGGAGCTTTTTGACAAGGATCTGGATGCGATCTTTATAAACAACAATCGTTTTGTGTTCGATCTTCCGGACAATTTTGGGAACTCGCCGGTGTCGGTCATCGTCGTTGCCAACAACAAGTTCCATGGCTGTCTCCCTGCGAGCTTGGGCAACATGACGAACCTGAACGAGATCATTCTGTTGAATAATGCCCTCCGTTCATGCTTGCCTTCAGAGATTGGGTTACTGAAGAACTTGACGGTGTTCGATGTGAGCTTCAATCAGCTCTTGGGTCCCTTGCCAGACACCATTGGAGGCATGGTGAGTCTTGAGCAGTTGAATGTAGCTCACAATTTGCTTTCTGGGAAAATTCCAGGGAGCATTTGTATGCTGCCAAATCTGCAGAACTTTACATATTCATATAACTTCTTCACTGGTGAGCCACCGTCGTGCCTCAGCTTGCCGTCGTTCGATGATCGGAGAAACTGTTTGCCGGCGAGGCCATTACAGAGGTCACCCGAACAATGTAAGTCATTTTTGTCACGGCCTGTGGACTGTAACTCGTTTAAGTGTAAGCCATTTGTTCCGTCACTTCCTCCACCCCCAAACCCTTCTCCTCCTATTCCTGTACCTTCCCCACCACCTGTTGTCGTGCCTTCACCGCCTCCGTCACCGGTTTACGTTCCACACTCTCCGCCTCCACCTTCACCGCCACCTCCTGTGTATTCACCCCCACCTCCGCCACCTCCTCCGCCGGTTTATTCCCCACCTCCTCCACCACCAGTCTACTCTCCACCTCCTCCTCCACCTTCGCCACCCCCACCGCCACCTCCTCCACCTTCACCTCCCCCGCCGGTCTATTCTCCGCCTCCACCCCCATCTTCACCACCCCCTCCTTCACCACCTCCGCCAGTCTATTATCCACCCCCACCGTCTCCGCCGCCACCTTCTCCTCCACCACCTACTCCATCGCCGCCGCCACCATCACCTCCCCCTCCATCTCCTCCACCACCTTCACCCACTCCAACTCCACCGTATTGCGTCCGTTCTCCTCCCCCACCGCCACCAAATTCACCGCCGCCACCTACTCCAGTATTTTACCCACCTCCACCGACATACACCTCGCCTCCGCCGCCTCATCACTTGCCTCCACCACCACCTCACTATCCCCCGCCTCCTCCACACTCACCTCCACCGCCTGTTTATCCCTATTTATCACCGCCGCCGCCGCCTCCGGTACATTCTCCTCCTCCCCCTGTCCATTCACCTCCCCCACCATCACCCCCGCCTTGTATAGAGCCACCTCCACCTCCTCCACCACCTTGTGAAGAGCATCCACCACCGCCACCATCTCCCACACCTTATTTGCCACCTCCATCCCCCTCTCCCCCTCCACCACCAGCTCCGGTTCACTATAGTTCCCCGCCGCCGCCGCCAGTTCAATACAGTTCACCGCCGCCTCCTCCACCAGCAGTTCATTACAGTTCTCCCCCACCGCCAGTATACCATTCTCCCCCGCTACCATCACCACCTCCCTGTGAAACCCCACCTTCTCCGTCCCCACCTCCGCCAGTCACATACGAAAACCCTCCACCTGCTCCTGTATATGAAGGGCCTTTGCCACCTGTCTTCGGAGTCTCTTACGCATCTCCGCCTCCACCACCCTTCTATTGA | 2286 | 0.5446 | MKRKVYFPLLIAFFLGILSLAVTADVPITSHGALTDAEALYIRQRQLLYYRDEFGDRGEHVTVDPSLVFENNRIRNAYIALRAWKQAILSDPNNCTLNWVGPNVCNYSNVFCASALDNPKVRTVAGIDLNHCDIAGYLPEELGLLADLALLHINSNRFCGTVPHKFDRLKLLFELDLSNNRFAGKFPTVVLRLPALKFLDLRFNEFEGTVPRELFDKDLDAIFINNNRFVFDLPDNFGNSPVSVIVVANNKFHGCLPASLGNMTNLNEIILLNNALRSCLPSEIGLLKNLTVFDVSFNQLLGPLPDTIGGMVSLEQLNVAHNLLSGKIPGSICMLPNLQNFTYSYNFFTGEPPSCLSLPSFDDRRNCLPARPLQRSPEQCKSFLSRPVDCNSFKCKPFVPSLPPPPNPSPPIPVPSPPPVVVPSPPPSPVYVPHSPPPPSPPPPVYSPPPPPPPPPVYSPPPPPPVYSPPPPPPSPPPPPPPPPSPPPPVYSPPPPPSSPPPPSPPPPVYYPPPPSPPPPSPPPPTPSPPPPSPPPPSPPPPSPTPTPPYCVRSPPPPPPNSPPPPTPVFYPPPPTYTSPPPPHHLPPPPPHYPPPPPHSPPPPVYPYLSPPPPPPVHSPPPPVHSPPPPSPPPCIEPPPPPPPPCEEHPPPPPSPTPYLPPPSPSPPPPPAPVHYSSPPPPPVQYSSPPPPPPAVHYSSPPPPVYHSPPLPSPPPCETPPSPSPPPPVTYENPPPAPVYEGPLPPVFGVSYASPPPPPFY | 761 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Prci1866g0001 | 761 | FunFam | Leucine-rich repeat extensin-like protein 5 | 240 | 379 | - | - | |
| Prci1866g0001 | 761 | Gene3D | Ribonuclease Inhibitor | 78 | 239 | IPR032675 | - | |
| Prci1866g0001 | 761 | Pfam | Leucine rich repeat | 148 | 205 | IPR001611 | GO:0005515 | |
| Prci1866g0001 | 761 | FunFam | Leucine-rich repeat extensin-like protein 1 | 78 | 239 | - | - | |
| Prci1866g0001 | 761 | PRINTS | Proline rich extensin signature | 426 | 438 | - | - | |
| Prci1866g0001 | 761 | PRINTS | Proline rich extensin signature | 403 | 419 | - | - | |
| Prci1866g0001 | 761 | PRINTS | Proline rich extensin signature | 444 | 465 | - | - | |
| Prci1866g0001 | 761 | Gene3D | Ribonuclease Inhibitor | 240 | 383 | IPR032675 | - | |
| Prci1866g0001 | 761 | MobiDBLite | consensus disorder prediction | 428 | 748 | - | - | |
| Prci1866g0001 | 761 | SUPERFAMILY | L domain-like | 79 | 361 | - | - |
Showing 1 to 10 of 11 entries
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Prci1866g0001 | - | - | qsa:O6P43_007947 | 672.544 |
Showing 1 to 1 of 1 entries