Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1866g0001 ATGAAGAGGAAGGTCTATTTCCCTCTTCTCATTGCCTTCTTCTTAGGCATACTCTCTCTCGCCGTCACTGCCGATGTCCCCATTACCAGCCATGGAGCCCTCACCGACGCCGAAGCCTTGTACATCAGGCAACGTCAGCTTCTTTACTACAGAGACGAGTTCGGCGACAGAGGAGAACATGTTACCGTCGACCCTTCCCTGGTCTTCGAGAACAATCGCATTAGAAATGCTTATATAGCTTTACGAGCTTGGAAGCAAGCGATTCTTTCGGATCCGAATAATTGCACGCTCAATTGGGTTGGACCAAATGTGTGTAACTACAGTAATGTTTTCTGTGCTTCGGCACTGGATAACCCTAAGGTTCGTACTGTCGCTGGCATTGATCTCAACCACTGTGACATTGCTGGGTACTTGCCGGAAGAGCTTGGATTGCTCGCGGATCTTGCTCTCCTCCACATCAACTCCAACAGGTTTTGTGGTACTGTTCCTCACAAGTTTGATAGACTGAAACTCCTGTTTGAACTGGATCTCAGTAACAATAGGTTCGCCGGGAAGTTCCCCACGGTGGTTCTGAGGCTTCCCGCGCTCAAGTTCTTGGATCTGAGATTTAATGAATTTGAAGGGACAGTGCCTAGGGAGCTTTTTGACAAGGATCTGGATGCGATCTTTATAAACAACAATCGTTTTGTGTTCGATCTTCCGGACAATTTTGGGAACTCGCCGGTGTCGGTCATCGTCGTTGCCAACAACAAGTTCCATGGCTGTCTCCCTGCGAGCTTGGGCAACATGACGAACCTGAACGAGATCATTCTGTTGAATAATGCCCTCCGTTCATGCTTGCCTTCAGAGATTGGGTTACTGAAGAACTTGACGGTGTTCGATGTGAGCTTCAATCAGCTCTTGGGTCCCTTGCCAGACACCATTGGAGGCATGGTGAGTCTTGAGCAGTTGAATGTAGCTCACAATTTGCTTTCTGGGAAAATTCCAGGGAGCATTTGTATGCTGCCAAATCTGCAGAACTTTACATATTCATATAACTTCTTCACTGGTGAGCCACCGTCGTGCCTCAGCTTGCCGTCGTTCGATGATCGGAGAAACTGTTTGCCGGCGAGGCCATTACAGAGGTCACCCGAACAATGTAAGTCATTTTTGTCACGGCCTGTGGACTGTAACTCGTTTAAGTGTAAGCCATTTGTTCCGTCACTTCCTCCACCCCCAAACCCTTCTCCTCCTATTCCTGTACCTTCCCCACCACCTGTTGTCGTGCCTTCACCGCCTCCGTCACCGGTTTACGTTCCACACTCTCCGCCTCCACCTTCACCGCCACCTCCTGTGTATTCACCCCCACCTCCGCCACCTCCTCCGCCGGTTTATTCCCCACCTCCTCCACCACCAGTCTACTCTCCACCTCCTCCTCCACCTTCGCCACCCCCACCGCCACCTCCTCCACCTTCACCTCCCCCGCCGGTCTATTCTCCGCCTCCACCCCCATCTTCACCACCCCCTCCTTCACCACCTCCGCCAGTCTATTATCCACCCCCACCGTCTCCGCCGCCACCTTCTCCTCCACCACCTACTCCATCGCCGCCGCCACCATCACCTCCCCCTCCATCTCCTCCACCACCTTCACCCACTCCAACTCCACCGTATTGCGTCCGTTCTCCTCCCCCACCGCCACCAAATTCACCGCCGCCACCTACTCCAGTATTTTACCCACCTCCACCGACATACACCTCGCCTCCGCCGCCTCATCACTTGCCTCCACCACCACCTCACTATCCCCCGCCTCCTCCACACTCACCTCCACCGCCTGTTTATCCCTATTTATCACCGCCGCCGCCGCCTCCGGTACATTCTCCTCCTCCCCCTGTCCATTCACCTCCCCCACCATCACCCCCGCCTTGTATAGAGCCACCTCCACCTCCTCCACCACCTTGTGAAGAGCATCCACCACCGCCACCATCTCCCACACCTTATTTGCCACCTCCATCCCCCTCTCCCCCTCCACCACCAGCTCCGGTTCACTATAGTTCCCCGCCGCCGCCGCCAGTTCAATACAGTTCACCGCCGCCTCCTCCACCAGCAGTTCATTACAGTTCTCCCCCACCGCCAGTATACCATTCTCCCCCGCTACCATCACCACCTCCCTGTGAAACCCCACCTTCTCCGTCCCCACCTCCGCCAGTCACATACGAAAACCCTCCACCTGCTCCTGTATATGAAGGGCCTTTGCCACCTGTCTTCGGAGTCTCTTACGCATCTCCGCCTCCACCACCCTTCTATTGA 2286 0.5446 MKRKVYFPLLIAFFLGILSLAVTADVPITSHGALTDAEALYIRQRQLLYYRDEFGDRGEHVTVDPSLVFENNRIRNAYIALRAWKQAILSDPNNCTLNWVGPNVCNYSNVFCASALDNPKVRTVAGIDLNHCDIAGYLPEELGLLADLALLHINSNRFCGTVPHKFDRLKLLFELDLSNNRFAGKFPTVVLRLPALKFLDLRFNEFEGTVPRELFDKDLDAIFINNNRFVFDLPDNFGNSPVSVIVVANNKFHGCLPASLGNMTNLNEIILLNNALRSCLPSEIGLLKNLTVFDVSFNQLLGPLPDTIGGMVSLEQLNVAHNLLSGKIPGSICMLPNLQNFTYSYNFFTGEPPSCLSLPSFDDRRNCLPARPLQRSPEQCKSFLSRPVDCNSFKCKPFVPSLPPPPNPSPPIPVPSPPPVVVPSPPPSPVYVPHSPPPPSPPPPVYSPPPPPPPPPVYSPPPPPPVYSPPPPPPSPPPPPPPPPSPPPPVYSPPPPPSSPPPPSPPPPVYYPPPPSPPPPSPPPPTPSPPPPSPPPPSPPPPSPTPTPPYCVRSPPPPPPNSPPPPTPVFYPPPPTYTSPPPPHHLPPPPPHYPPPPPHSPPPPVYPYLSPPPPPPVHSPPPPVHSPPPPSPPPCIEPPPPPPPPCEEHPPPPPSPTPYLPPPSPSPPPPPAPVHYSSPPPPPVQYSSPPPPPPAVHYSSPPPPVYHSPPLPSPPPCETPPSPSPPPPVTYENPPPAPVYEGPLPPVFGVSYASPPPPPFY 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1866g0001 761 FunFam Leucine-rich repeat extensin-like protein 5 240 379 - -
Prci1866g0001 761 Gene3D Ribonuclease Inhibitor 78 239 IPR032675 -
Prci1866g0001 761 Pfam Leucine rich repeat 148 205 IPR001611 GO:0005515
Prci1866g0001 761 FunFam Leucine-rich repeat extensin-like protein 1 78 239 - -
Prci1866g0001 761 PRINTS Proline rich extensin signature 426 438 - -
Prci1866g0001 761 PRINTS Proline rich extensin signature 403 419 - -
Prci1866g0001 761 PRINTS Proline rich extensin signature 444 465 - -
Prci1866g0001 761 Gene3D Ribonuclease Inhibitor 240 383 IPR032675 -
Prci1866g0001 761 MobiDBLite consensus disorder prediction 428 748 - -
Prci1866g0001 761 SUPERFAMILY L domain-like 79 361 - -
Prci1866g0001 761 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 24 514 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1866g0001 5 395 Trihelix Transcription Factor Family AT4G18670 72.959 0.0 619
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1866g0001 - - qsa:O6P43_007947 672.544