Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1865g0003 ATGGGAGAACTTGCTTCCTTTGTTTTTGTTCTCTTACTTCATTGCTTCATGGCCTCCTTAGCTTGGAGTAGTGAGACAAATATCACCACCGACACATCAGCACTTCTTGCTTTTAAATCCATTATCACTTCAGATCCATATGATTTCTTAGCTAATTGGTCTGTCTCCTCTTCTCCATGCAATTGGGTTGGTGTCACTTGCAATACTCGCCATGGAAGGATTCATTCTTTAAATCTTGGAGATATGGGTCTTACAGGCATGATATCTCCAAAATTAGGAAATCTCTCATTCCTTGTTGAACTTAATCTTGGTGACAACAACTTTCATGGTGAAATGCCAAAAGAGTTAGTTCAATTGCGAAGATTGAAACAACTCAACCTGAGCTTTAATGAATTCCATGGAGAGGTTCCAGCATGGATAGGGGAGTTGTCAACACTACAACACTTGAGCCTTCGCAATAATAGTTTTAGTGGATTCATTCCAATGTCTATATTCAACTTGTCAAGGTTGGAGATCTTAAATTGGAATTTTAATTTAATTGAAGGCACCATTCCACCTGAGGTGGGAAGACTTGAGAACTTAGAGATTTTACGTCTTGCTGGTAACAAACTTTCAGGAGGCATTCCCAATGAAATTGGCAATCTTCCACAGCTACAAATGATATATCTTTCAAACAATCAGCTTTCTGGTTCCATACCATTCTCATTATTTAATAGTTCAATGCTTCAAGTCATTGAGCTTAATTATAATAATCTCTCTGGGAGTCTCCCAACAAAAATGTGTTTTGGGCTTCCGAAACTTGAAAAATTTCAGGTGTTTGCAAATGATTTATCCGGTGAAATACCTTCCGTTTGGCACCAATGCAAGGAATTGATAGATTTGTCATTATCAAATAATGGATTCAACAAAGGATATATACCAAATGATATTGGAAATTTGACCAACCTCCAATTCCTATATCTTGACAACAACAATTTGGAAGGTGAAATTCCATCATCTCTCTTCAATATCCATTCTTTAAGAGAAGTAAGTTTATGGGGAAACAATTTAGCTGGTACTCTTCCAATATCAATTGCCAATTGGACGTTGCTGGAATACTTATATTTAAGTCATAATTCCTTCACAGGTGAAATTCCAAAACTTCTATTTAACATGCCTTCTTTGACAATTGTTGACCTTTCCAAGAACAATTTATATGGTAATATGCCAGAAGAGATGTGCCGTCAATTCTCTTTTCTTAAAATCTTCTCAGTTGCTGAGAATCAATTAGAGGGAAAAATTCCAAAATCAATAAGTAATTGCACATCTTTAAAATGGTTTGAACTTTCCCACAATCATTTTCATGGTAATCTACCAGAAGAGATGTGCCAAAGACTCCCATTACTTGAAGCCATCCAGATCGTTGATAATAAATTAGAAGGAAGCATTCCAGAATCATTAAGTAACTGCACATCTTTAACAAGATTATTTTTGGATGTCAACTCATTTACAGGTTTTATACCCAAGGGCATAGGAAATCTTGCTAAACTTCAAGAGTTAGCTTTGGCAGATAATTATTTGCATGGGCCTATACCTTCCACCATATTCAACATCTCATCATTGATACATGTGTACCTTGGAACTAACTTCCTCTCTGGCCTTTTGCCATCATATCTAGGAAGTGGCCTTCCCAACCTAAACTTATTGAGTTTGGAGGGAAATGAACTTACTGGACAAATTCCCAACAGTATCTCAAATGCTTCTAAGCTCACTGAGTTAGTTTTAGCATCAAATAAATTTAGTGGAGCTATACCCAATTTACTTGGGAATTTAACCAATTTGATGACAATGGAATTTGGTTGGAATAACTTCAATGGGTTGATTCCTACTGCAATCAACAAACTACAAAGCCTTCAATATTTAAGTCTCTATTACAATAGAATGCAAGGGTCTATCATTGATGAAATTTGTCAACTCAAAAGTTTAAGTGAGTTGGATCTAGCTGGCAACATGTTTACAGGAATGATCCCCGCATGTCTTGGGAATCTATCTTCTTTGAGAAAGTTGGATTTCAGCTCTAACAAATTGATTTCTCATATTCCCTCCTCATTTTGGAGTCTTGAAGATATCATGGAATTAGATTTGTCCTCCAATACATTGAGTGGAACAATTCCACTTGAGATTTCAAACATGAGGGCACTTACACTCTTGAATTTATCAAGAAATCAAATTTCAGGAAACATCCCTGAATCTATGGGTGGCTTGAAGACTTTGTTGAACCTATCTTTGGCTCACAACAAATTCCAGGGGCCTATTCCTAAATCACTTGGTGGCATGATAAGTATTGAGTTCTTGGATCTTTCTCAAAATTATTTGTCTGGTGTGATTCCAAAGTCCTTAGAGTCTCTTGTCTATATGAAGTACATTAACCTTTCCTACAATTTCTTATATGGAGAAATTCCAAATGGTGGGCCTTTCCAAAATTTTACAGCTGAATCTTTTATGATGAATGAAAATCTTTGTGGAAGGCCCCAACTTCATATCCAACCATGTAGAAAAGAAAACAAGCATAGGTCAAATAAAGTGATGCTTTTGATCATATGCTTGGTGCCTATAATAGTTTTCATTTTGGTTGTTTCATGCATAGTCTTTCTAAAGCATAAGAGAAAACATGCTAATGATTCAACCGATGCGGTTTTAATGAATTTGGAGATACCAATAAGAATATCCTATTATGAAATTCTACAAGGAACAAATAGGTTTGATGAAAGTAATCTACTTGGAAGGGGAAGTTTTGGATCAGTATACAAAGCAACATTGTCAAATGGAAAGACAGTTGCTATTAAAATATTTAACTTTGACTTGGAAGAGGCATGGAAGAGTTTTGATACAGAATGCACTGCCATATGCAATTTACGTCACCGCAATCTCATCAGCATCATAAGCAGCTGCTCTAATGATAATTTTAAATCATTAATCATGGAGTTTATGTCAAATGGAAGTCTTAATAAATGGTTGTACTCTCATAACTATTGCTTGGATATTTTTCAAAGATTGAATATAATGATTGATGTGGCTTCAGCACTAGAATATCTTCATAGTGGTTCCTCTACACCAGTGGTTCATTGTGATGTGAAGCCAAGCAATGTTTTATTGGATGAAAATATGGTGGCACATCTCAGTGATTTTGGTATTGCCAAATTATTAGGTGACACAGAATCAGAAATTTACACCAAGACTTTGGCTACAATTGGCTATATGGCACCAGAGTATGGATCAAAAGGAGCTATTTCTAGTAAAGGAGATGTGTATAGTTATGGCATTTTGCTCATGGAAATGCTGACGAGGAAAAATCCAACAGATGACCTGTTTAATGAAAGTCTAAGTTTGAAGGATTGGGTTAGCAAATCAACTCCTCATTCAATAATCAACATTTTAGATGTCAATTTGCTGCAAGGAGACAATCAAAATATTGGCAAAATATTGTCACATGTGTCATCAATATTTGAGTTGGCCTTGAATTGTTGTGCTGATTTACCGGAGACACGAATTAATATGACAGATGTTGTAGTATTCTTGAAAAAATTTAAGGTCTCATTTTTAAAAAATGTTAGAGCCGCACTGGTTGAGTAA 3612 0.3566 MGELASFVFVLLLHCFMASLAWSSETNITTDTSALLAFKSIITSDPYDFLANWSVSSSPCNWVGVTCNTRHGRIHSLNLGDMGLTGMISPKLGNLSFLVELNLGDNNFHGEMPKELVQLRRLKQLNLSFNEFHGEVPAWIGELSTLQHLSLRNNSFSGFIPMSIFNLSRLEILNWNFNLIEGTIPPEVGRLENLEILRLAGNKLSGGIPNEIGNLPQLQMIYLSNNQLSGSIPFSLFNSSMLQVIELNYNNLSGSLPTKMCFGLPKLEKFQVFANDLSGEIPSVWHQCKELIDLSLSNNGFNKGYIPNDIGNLTNLQFLYLDNNNLEGEIPSSLFNIHSLREVSLWGNNLAGTLPISIANWTLLEYLYLSHNSFTGEIPKLLFNMPSLTIVDLSKNNLYGNMPEEMCRQFSFLKIFSVAENQLEGKIPKSISNCTSLKWFELSHNHFHGNLPEEMCQRLPLLEAIQIVDNKLEGSIPESLSNCTSLTRLFLDVNSFTGFIPKGIGNLAKLQELALADNYLHGPIPSTIFNISSLIHVYLGTNFLSGLLPSYLGSGLPNLNLLSLEGNELTGQIPNSISNASKLTELVLASNKFSGAIPNLLGNLTNLMTMEFGWNNFNGLIPTAINKLQSLQYLSLYYNRMQGSIIDEICQLKSLSELDLAGNMFTGMIPACLGNLSSLRKLDFSSNKLISHIPSSFWSLEDIMELDLSSNTLSGTIPLEISNMRALTLLNLSRNQISGNIPESMGGLKTLLNLSLAHNKFQGPIPKSLGGMISIEFLDLSQNYLSGVIPKSLESLVYMKYINLSYNFLYGEIPNGGPFQNFTAESFMMNENLCGRPQLHIQPCRKENKHRSNKVMLLIICLVPIIVFILVVSCIVFLKHKRKHANDSTDAVLMNLEIPIRISYYEILQGTNRFDESNLLGRGSFGSVYKATLSNGKTVAIKIFNFDLEEAWKSFDTECTAICNLRHRNLISIISSCSNDNFKSLIMEFMSNGSLNKWLYSHNYCLDIFQRLNIMIDVASALEYLHSGSSTPVVHCDVKPSNVLLDENMVAHLSDFGIAKLLGDTESEIYTKTLATIGYMAPEYGSKGAISSKGDVYSYGILLMEMLTRKNPTDDLFNESLSLKDWVSKSTPHSIINILDVNLLQGDNQNIGKILSHVSSIFELALNCCADLPETRINMTDVVVFLKKFKVSFLKNVRAALVE 1203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1865g0003 1203 SMART serkin_6 914 1190 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1865g0003 1203 Pfam Leucine rich repeat N-terminal domain 30 68 IPR013210 -
Prci1865g0003 1203 SMART LRR_typ_2 772 795 IPR003591 -
Prci1865g0003 1203 SMART LRR_typ_2 652 675 IPR003591 -
Prci1865g0003 1203 SMART LRR_typ_2 191 214 IPR003591 -
Prci1865g0003 1203 SMART LRR_typ_2 724 748 IPR003591 -
Prci1865g0003 1203 SMART LRR_typ_2 556 580 IPR003591 -
Prci1865g0003 1203 SMART LRR_typ_2 215 239 IPR003591 -
Prci1865g0003 1203 SMART LRR_typ_2 95 119 IPR003591 -
Prci1865g0003 1203 SMART LRR_typ_2 313 337 IPR003591 -
Prci1865g0003 1203 SMART LRR_typ_2 385 409 IPR003591 -
Prci1865g0003 1203 SMART LRR_typ_2 507 531 IPR003591 -
Prci1865g0003 1203 SMART LRR_typ_2 676 700 IPR003591 -
Prci1865g0003 1203 SMART LRR_typ_2 143 167 IPR003591 -
Prci1865g0003 1203 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 719 841 - -
Prci1865g0003 1203 FunFam Serine-threonine protein kinase plant-type 895 989 - -
Prci1865g0003 1203 Gene3D Ribonuclease Inhibitor 552 847 IPR032675 -
Prci1865g0003 1203 Gene3D Ribonuclease Inhibitor 223 409 IPR032675 -
Prci1865g0003 1203 PANTHER OS04G0122200 PROTEIN 593 1195 - -
Prci1865g0003 1203 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1033 1045 IPR008271 GO:0004672|GO:0006468
Prci1865g0003 1203 ProSitePatterns Protein kinases ATP-binding region signature. 920 942 IPR017441 GO:0005524
Prci1865g0003 1203 SUPERFAMILY Protein kinase-like (PK-like) 895 1186 IPR011009 -
Prci1865g0003 1203 SUPERFAMILY RNI-like 296 618 - -
Prci1865g0003 1203 Gene3D Transferase(Phosphotransferase) domain 1 990 1198 - -
Prci1865g0003 1203 ProSiteProfiles Protein kinase domain profile. 914 1194 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1865g0003 1203 Gene3D Ribonuclease Inhibitor 410 551 IPR032675 -
Prci1865g0003 1203 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 183 429 - -
Prci1865g0003 1203 FunFam Leucine-rich repeat receptor-like protein kinase TDR 431 718 - -
Prci1865g0003 1203 SUPERFAMILY L domain-like 29 301 - -
Prci1865g0003 1203 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 28 182 - -
Prci1865g0003 1203 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 990 1199 - -
Prci1865g0003 1203 Gene3D Ribonuclease Inhibitor 145 214 IPR032675 -
Prci1865g0003 1203 Gene3D Ribonuclease Inhibitor 30 144 IPR032675 -
Prci1865g0003 1203 SUPERFAMILY L domain-like 579 838 - -
Prci1865g0003 1203 Pfam Protein kinase domain 915 1182 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1865g0003 1203 Gene3D Phosphorylase Kinase; domain 1 874 989 - -
Prci1865g0003 1203 Pfam Leucine rich repeat 190 228 IPR001611 GO:0005515
Prci1865g0003 1203 Pfam Leucine rich repeat 582 640 IPR001611 GO:0005515
Prci1865g0003 1203 Pfam Leucine rich repeat 339 398 IPR001611 GO:0005515
Prci1865g0003 1203 Pfam Leucine rich repeat 654 713 IPR001611 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1865g0003 1 1190 Receptor kinase-like Gene Family AT5G46330 33.715 0.0 619
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Prci1865g0003 Pkinase 8.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1865g0003 - K13420 gmx:100784397 1134.01