Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1865g0002 ATGGGAGAACTTGCTTCCTTTGTTTTTGTTCTCTTACTTCATTGCTTCATGGCCTCCTTAGCTTGGAGTAGTGAGACAAATATCACCACCGACACATCAGCACTTCTTGCTTTTAAATCCATTATCACTTCAGATCCATATGATTTCTTAGCTAATTGGTCTGTCTCCTCTTCTCCATGCAATTGGGTTGGTGTCACTTGCAATACTCGCCATGGAAGGATTCATTCTTTAAATCTTGGAGATATGGGTCTTACAGGCATGATATCTCCAAAATTAGGAAATCTCTCATTCCTTGTTGAACTTAATCTTGGTGACAACAACTTTCATGGTGAAATGCCAAAAGAGTTAGTTCAATTGCGAAGATTGAAACAACTCAACCTGAGCTTTAATGAATTCCATGGAGAGGTTCCAGCATGGATAGGGGAGTTGTCAACACTACAACACTTGAGCCTTCGCAATAATAGTTTTAGTGGATTCATTCCAATGTCTATATTCAACTTGTCAAGGTTGGAGATCTTAAATTGGAATTTTAATTTAATTGAAGGCACCATTCCACCTGAGGTGGGAAGACTTGAGAACTTAGAGATTTTACGTCTTGCTGGTAACAAACTTTCAGGGACCATTCCACTTGAGGTGGGAAGACTTAGAAGCTTGAAGGCCTTATATCTTGAAGGCAATAGACTTTCAGGAATCATTCCTCAAACAATTTTCAACTTATCTTCACTTGAATTGTTAAATTTGTCGAAGAATTATTTGTCAGGAGGCATTCCCAATGAAATTGGCAATCTTCCACAGCTACAAATGATATATCTTTCAAACAATCAGCTTTCTGGTTCCATACCATTCTCATTATTTAATAGTTCAATGCTTCAAGTCATTGAGCTTAATTATAATAATCTCTCTGGGAGTCTCCCAACAAAAATGTGTTTTGGGCTTCCGAAACTTGAAAAATTTCAGGTGTTTGCAAATGATTTATCCGGTGAAATACCTTCCGTTTGGCACCAATGCAAGGAATTGATAGATTTGTCATTATCAAATAATGGATTCAACAAAGGATATATACCAAATGATATTGGAAATTTGACCAACCTCCAATTCCTATATCTTGACAACAACAATTTGGAAGGTGAAATTCCATCATCTCTCTTCAATATCCATTCTTTAAGAGAAGTAAGTTTATGGGGAAACAATTTAGCTGGTACTCTTCCAATATCAATTGCCAATTGGACGTTGCTGGAATACTTATATTTAAGTCATAATTCCTTCACAGAAGAGATGTGCCAAAGACTCCCATTACTTGAAGCCATCCAGATCGTTGATAATAAATTAGAAGGAAGCATTCCAGAATCATTAAGTAACTGCACATCTTTAACAAGATTATTTTTGGATGTCAACTCATTTACAGGTTTTATACCCAAGGGCATAGGAAATCTTGCTAAACTTCAAGAGTTAGCTTTGGCAGATAATTATTTGCATGGGCCTATACCTTCCACCATATTCAACATCTCATCATTGATACATGTGTACCTTGGAACTAACTTCCTCTCTGGCCTTTTGCCATCATATCTAGGAAGTGGCCTTCCCAACCTAAACTTATTGAGTTTGGAGGGAAATGAACTTACTGGACAAATTCCCAACAGTATCTCAAATGCTTCTAAGCTCACTGAGTTAGTTTTAGCATCAAATAAATTTAGTGGAGCTATACCCAATTTACTTGGGAATTTAACCAATTTGATGACAATGGAATTTGGTTGGAATAACTTCAATGGGTTGATTCCTACTGCAATCAACAAACTACAAAGCCTTCAATATTTAAGTCTCTATTACAATAGAATGCAAGGGTCTATCATTGATGAAATTTGTCAACTCAAAAGTTTAAGTGAGTTGGATCTAGCTGGCAACATGTTTACAGGAATGATCCCCGCATGTCTTGGGAATCTATCTTCTTTGAGAAAGTTGGATTTCAGCTCTAACAAATTGATTTCTCATATTCCCTCCTCATTTTGGAGTCTTGAAGATATCATGGAATTAGATTTGTCCTCCAATACATTGAGTGGAACAATTCCACTTGAGATTTCAAACATGAGGGCACTTACACTCTTGAATTTATCAAGAAATCAAATTTCAGGAAACATCCCTGAATCTATGGGTGGCTTGAAGACTTTGTTGAACCTATCTTTGGCTCACAACAAATTCCAGGGGCCTATTCCTAAATCACTTGGTGGCATGATAAGTATTGAGTTCTTGGATCTTTCTCAAAATTATTTGTCTGGTGTGATTCCAAAGTCCTTAGAGTCTCTTGTCTATATGAAGTACATTAACCTTTCCTACAATTTCTTATATGGAGAAATTCCAAATGGTGGGCCTTTCCAAAATTTTACAGCTGAATCTTTTATGATGAATGAAAATCTTTGTGGAAGGCCCCAACTTCATATCCAACCATGTAGAAAAGAAAACAAGCATAGGTCAAATAAAGTGATGCTTTTGATCATATGCTTGGTGCCTATAATAGTTTTCATTTTGGTTGTTTCATGCATAGTCTTTCTAAAGCATAAGAGAAAACATGCTAATGATTCAACCGATGCGGTTTTAATGAATTTGGAGATACCAATAAGAATATCCTATTATGAAATTCTACAAGGAACAAATAGGTTTGATGAAAGTAATCTACTTGGAAGGGGAAGTTTTGGATCAGTATACAAAGCAACATTGTCAAATGGAAAGACAGTTGCTATTAAAATATTTAACTTTGACTTGGAAGAGGCATGGAAGAGTTTTGATACAGAATGCACTGCCATATGCAATTTACGTCACCGCAATCTCATCAGCATCATAAGCAGCTGCTCTAATGATAATTTTAAATCATTAATCATGGAGTTTATGTCAAATGGAAGTCTTAATAAATGGTTGTACTCTCATAACTATTGCTTGGATATTTTTCAAAGATTGAATATAATGATTGATGTGGCTTCAGCACTAGAATATCTTCATAGTGGTTCCTCTACACCAGTGGTTCATTGTGATGTGAAGCCAAGCAATGTTTTATTGGATGAAAATATGGTGGCACATCTCAGTGATTTTGGTATTGCCAAATTATTAGGTGACACAGAATCAGAAATTTACACCAAGACTTTGGCTACAATTGGCTATATGGCACCAGAGTATGGATCAAAAGGAGCTATTTCTAGTAAAGGAGATGTGTATAGTTATGGCATTTTGCTCATGGAAATGCTGACGAGGAAAAATCCAACAGATGACCTGTTTAATGAAAGTCTAAGTTTGAAGGATTGGGTTAGCAAATCAACTCCTCATTCAATAATCAACATTTTAGATGTCAATTTGCTGCAAGGAGACAATCAAAATATTGGCAAAATATTGTCACATGTGTCATCAATATTTGAGTTGGCCTTGAATTGTTGTGCTGATTTACCGGAGACACGAATTAATATGACAGATGTTGTAGTATTCTTGAAAAAATTTAAGGTCTCATTTTTAAAAAATGTTAGAGCCGCACTGGTTGAGTAA 3525 0.3589 MGELASFVFVLLLHCFMASLAWSSETNITTDTSALLAFKSIITSDPYDFLANWSVSSSPCNWVGVTCNTRHGRIHSLNLGDMGLTGMISPKLGNLSFLVELNLGDNNFHGEMPKELVQLRRLKQLNLSFNEFHGEVPAWIGELSTLQHLSLRNNSFSGFIPMSIFNLSRLEILNWNFNLIEGTIPPEVGRLENLEILRLAGNKLSGTIPLEVGRLRSLKALYLEGNRLSGIIPQTIFNLSSLELLNLSKNYLSGGIPNEIGNLPQLQMIYLSNNQLSGSIPFSLFNSSMLQVIELNYNNLSGSLPTKMCFGLPKLEKFQVFANDLSGEIPSVWHQCKELIDLSLSNNGFNKGYIPNDIGNLTNLQFLYLDNNNLEGEIPSSLFNIHSLREVSLWGNNLAGTLPISIANWTLLEYLYLSHNSFTEEMCQRLPLLEAIQIVDNKLEGSIPESLSNCTSLTRLFLDVNSFTGFIPKGIGNLAKLQELALADNYLHGPIPSTIFNISSLIHVYLGTNFLSGLLPSYLGSGLPNLNLLSLEGNELTGQIPNSISNASKLTELVLASNKFSGAIPNLLGNLTNLMTMEFGWNNFNGLIPTAINKLQSLQYLSLYYNRMQGSIIDEICQLKSLSELDLAGNMFTGMIPACLGNLSSLRKLDFSSNKLISHIPSSFWSLEDIMELDLSSNTLSGTIPLEISNMRALTLLNLSRNQISGNIPESMGGLKTLLNLSLAHNKFQGPIPKSLGGMISIEFLDLSQNYLSGVIPKSLESLVYMKYINLSYNFLYGEIPNGGPFQNFTAESFMMNENLCGRPQLHIQPCRKENKHRSNKVMLLIICLVPIIVFILVVSCIVFLKHKRKHANDSTDAVLMNLEIPIRISYYEILQGTNRFDESNLLGRGSFGSVYKATLSNGKTVAIKIFNFDLEEAWKSFDTECTAICNLRHRNLISIISSCSNDNFKSLIMEFMSNGSLNKWLYSHNYCLDIFQRLNIMIDVASALEYLHSGSSTPVVHCDVKPSNVLLDENMVAHLSDFGIAKLLGDTESEIYTKTLATIGYMAPEYGSKGAISSKGDVYSYGILLMEMLTRKNPTDDLFNESLSLKDWVSKSTPHSIINILDVNLLQGDNQNIGKILSHVSSIFELALNCCADLPETRINMTDVVVFLKKFKVSFLKNVRAALVE 1174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1865g0002 1174 SUPERFAMILY L domain-like 312 589 - -
Prci1865g0002 1174 Gene3D Ribonuclease Inhibitor 188 309 IPR032675 -
Prci1865g0002 1174 Gene3D Ribonuclease Inhibitor 310 525 IPR032675 -
Prci1865g0002 1174 Gene3D Ribonuclease Inhibitor 526 824 IPR032675 -
Prci1865g0002 1174 ProSiteProfiles Protein kinase domain profile. 885 1165 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1865g0002 1174 Gene3D Phosphorylase Kinase; domain 1 845 960 - -
Prci1865g0002 1174 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 28 187 - -
Prci1865g0002 1174 SMART LRR_typ_2 478 502 IPR003591 -
Prci1865g0002 1174 SMART LRR_typ_2 647 671 IPR003591 -
Prci1865g0002 1174 SMART LRR_typ_2 95 119 IPR003591 -
Prci1865g0002 1174 SMART LRR_typ_2 623 646 IPR003591 -
Prci1865g0002 1174 SMART LRR_typ_2 695 719 IPR003591 -
Prci1865g0002 1174 SMART LRR_typ_2 143 167 IPR003591 -
Prci1865g0002 1174 SMART LRR_typ_2 263 287 IPR003591 -
Prci1865g0002 1174 SMART LRR_typ_2 215 239 IPR003591 -
Prci1865g0002 1174 SMART LRR_typ_2 361 385 IPR003591 -
Prci1865g0002 1174 SMART LRR_typ_2 527 551 IPR003591 -
Prci1865g0002 1174 SMART LRR_typ_2 743 766 IPR003591 -
Prci1865g0002 1174 SMART LRR_typ_2 191 214 IPR003591 -
Prci1865g0002 1174 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 309 524 - -
Prci1865g0002 1174 SMART LRR_sd22_2 478 504 - -
Prci1865g0002 1174 SMART LRR_sd22_2 263 284 - -
Prci1865g0002 1174 SMART LRR_sd22_2 599 622 - -
Prci1865g0002 1174 SMART LRR_sd22_2 191 212 - -
Prci1865g0002 1174 SMART LRR_sd22_2 647 663 - -
Prci1865g0002 1174 SMART LRR_sd22_2 361 387 - -
Prci1865g0002 1174 SMART LRR_sd22_2 215 241 - -
Prci1865g0002 1174 SMART serkin_6 885 1161 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1865g0002 1174 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 525 819 - -
Prci1865g0002 1174 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1004 1016 IPR008271 GO:0004672|GO:0006468
Prci1865g0002 1174 FunFam Serine-threonine protein kinase plant-type 866 960 - -
Prci1865g0002 1174 Gene3D Ribonuclease Inhibitor 28 187 IPR032675 -
Prci1865g0002 1174 SUPERFAMILY Protein kinase-like (PK-like) 866 1157 IPR011009 -
Prci1865g0002 1174 PANTHER LEUCINE RICH REPEAT KINASE 2 453 1160 - -
Prci1865g0002 1174 SUPERFAMILY L domain-like 29 323 - -
Prci1865g0002 1174 Gene3D Transferase(Phosphotransferase) domain 1 961 1169 - -
Prci1865g0002 1174 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 209 304 - -
Prci1865g0002 1174 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 961 1170 - -
Prci1865g0002 1174 Pfam Leucine rich repeat 216 276 IPR001611 GO:0005515
Prci1865g0002 1174 Pfam Leucine rich repeat 625 684 IPR001611 GO:0005515
Prci1865g0002 1174 Pfam Leucine rich repeat 553 611 IPR001611 GO:0005515
Prci1865g0002 1174 Pfam Protein kinase domain 886 1153 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1865g0002 1174 ProSitePatterns Protein kinases ATP-binding region signature. 891 913 IPR017441 GO:0005524
Prci1865g0002 1174 Pfam Leucine rich repeat N-terminal domain 30 68 IPR013210 -
Prci1865g0002 1174 SUPERFAMILY L domain-like 549 809 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1865g0002 1 1161 Receptor kinase-like Gene Family AT5G46330 34.841 0.0 633
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Prci1865g0002 Pkinase 7.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1865g0002 - K13420 qsa:O6P43_031966 1130.93