Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1860g0002 ATGAAGTTCAACATTGCGAATCCCACCACTGGATGCCAGAAGAAGCTGGAGATCGATGACGATCAGAAGCTGCGAGCTTTTTGGGACAAGCGTATCTCACAGGAGGTCAGCGGTGATGCTTTGGGCGAGGAATTCAAAGGCTATGTCTTCAAGATCACTGGTGGTTGTGACAAGCAAGGTTTTCCAATGAAACAGGGAGTGCTGACCCCTGGTCGTGTTCGTCTCTTGCTCCACAGAGGAACTCCTTGCTTCCGAGGATATGGAAGGCGCAATGGTGAACGCAGGAGAAAGTCTGTGCGTGGGTGCATTGTGAGCCCAGACCTCTCTGTTCTGAACTTGGTTATTGTGAAGAAGGGTGAAAATGATTTGCCTGGACTTACTGACATTGAGAAGCCAAGGATGAGAGGTCCAAAGAGAGCATCCAAAATCCGCAAGCTGTTTAACCTCTCCAAGGAGGATGATGTGAGGAAGTATGTCAACACCTATCGCCGTACCTTCACAACAAAATCTGGAAAAAAGGTGAGCAAGGCTCCTAAGATTCAAAGACTGGTCACACCTTTGACCCTCCAAAGGAAGCGTGCAAGGATTGCAGATAAGAAGAAGAGAATTGCCAAGGCGAAAGCAGAAGCAGCCGAGTATCAGAAACTTCTTGCCTCGAGGTTGAAGGAGCAGAGGGAGCGCCGAAGTGAGAGTTTGGCCAAGAGGAGATTCAGGCTTTCTAGTGCCAAGCAATCCGTCGCAGCATAG 747 0.4926 MKFNIANPTTGCQKKLEIDDDQKLRAFWDKRISQEVSGDALGEEFKGYVFKITGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGENDLPGLTDIEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKAKAEAAEYQKLLASRLKEQRERRSESLAKRRFRLSSAKQSVAA 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1860g0002 248 MobiDBLite consensus disorder prediction 219 237 - -
Prci1860g0002 248 Pfam Ribosomal protein S6e 1 128 IPR001377 GO:0003735|GO:0005840|GO:0006412
Prci1860g0002 248 MobiDBLite consensus disorder prediction 219 248 - -
Prci1860g0002 248 PIRSF RPS6e 1 248 IPR014401 GO:0003735|GO:0005840|GO:0006412
Prci1860g0002 248 SMART Ribosomal_S6e_2 1 128 IPR001377 GO:0003735|GO:0005840|GO:0006412
Prci1860g0002 248 Coils Coil 189 223 - -
Prci1860g0002 248 Gene3D - 133 234 - -
Prci1860g0002 248 PANTHER 40S RIBOSOMAL PROTEIN S6 1 239 IPR001377 GO:0003735|GO:0005840|GO:0006412
Prci1860g0002 248 ProSitePatterns Ribosomal protein S6e signature. 52 63 IPR018282 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1860g0002 1 242 Cytoplasmic Ribosomal Protein Gene Family AT5G10360 73.140 1.95e-119 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1860g0002 K02991 - sind:105176438 422.55