Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1852g0001 ATGTCGTCCACGGGGCTCCCCTTCTTTAACCCGTCTCAGCTGGAGCTCCTCCACCTGCCACATCCTCATGTCTCCGGTCCCACCCTCGGCGAGCTCCTCAAACGCGTCGACGATGCCCAAAACGACACCCCGCCCCACCGTATACTCCACCTCCCTCCCCCTCCTTCCTCCTACCCATTCATTCTTTCCTTCAACAGTTTAACGTACAGTGTCAAAGTCCGCCGCAAAATGACCCTCCCTCCGAACCACGTCGTTTCGGAACAAAGCAGTGCCACCAAGGGCACCAAGATTCTCCTCAATAACATTTCCGGCGAGGCCAGGGACGGACAGATCATGGGAGTACTCGGTGCCAGTGGCTCTGGTAAATCCACTCTTATTGATGCCCTCGCCGATCGTATCTCCAAGGACAGCTTGAAAGGCTCCGTCACCTTAAACGGCGAGGCTCTGGAATCCAGACTTCTCAAAGTGATTTCCGCTTACGTCATGCAAGATGACCTTCTCTTCCCCATGCTCACCGTGGAAGAGACTCTCATGTTCTCCGCCGAGTTTCGCCTCCCTCGCTCCCTCTCCGCCTCGAAGAAGAAGGCCAGAGTCCAGGCGCTCATCGACCAGCTTGGCCTCCAGAACGCAGCCAAAACAGTCATCGGAGACGAGGGCCACCGTGGCGTATCCGGAGGCGAAAGGCGTCGCGTCTCTATCGGAATCGACATCATCCACGATCCGATCATCCTATTCCTCGACGAACCTACTTCTGGACTGGACTCCACGAGCGCGTTCATGGTTGTTAAAGTTCTGCAGCGAATCGCTCAGAGTGGGAGCATCGTGGTCATGTCCATACACCAACCCAGTTATAGAATCCTCGGCTTATTAGACCGTTTGATTTTTCTCTCTCGCGGCCAAACCGTGTATACCGGCTCTCCCGCGAATCTCCCGCGCTTCTTCTTGGAGTTCGGTCACCCGATACCCGACAAAGAGAACCGGACCGAGTTCGCACTGGACCTCATTCGTGAGCTCGAAGAATCACCGGGTGGGACCCAGAGTTTAGTGGAGTTCAACAAATCGTGGCAGTTAATTGCAGCCAAAAGCAAGCCAGCCACCAACCGATTCTTCACCGGAACACTCATGGACGCCATCGCAGCCAGCATCTCCAGGGGCAAGTTAGTGTGCGGCGCACCGCATAGTTCCAACGTTGCAACGTCGTCGGTTCCGACTTATGCCAATCCATTTTGGATGGAGATGATGGTGATAGCGAAACGATCGGTGACCAATTCCAGAAGAATGCCAGAACTATTCGGAATCCGACTCGGTGCGGTTCTCGTAACTGGAGGGATCCTGGCCACCATTTTTTGGCACCTGGATGATACTCCTAAAGGCGTTCAAGAGCGTCTCGGTTTCTTCGCCTTCGCGATGTCCACCACCTTCTACACCTGCGCCGAGGCCTTCCCCGTCTTCCTCCAAGAGCGATACATCTTCATGAGAGAAACTGCTTACAATGCTTACCGGCGCTGGTCCTACGTCCTGGCCCATTCCATCATCTCAATCCCCTCCTTAGCAATCCTCTCTTTAGCATTCGCCGCCACCACATTCTGGTCGGTGGGCCTCGCGGGCGGCAGTTCCGGCTTCCTGTTCTACTTCCTCGTCATGTTCGCTTCCTTCTGGGCGGGAAGCTCCTTCGTGACGTTCCTATCGGGGATAGTTTCTCATGTGATGTTGGGCTTTACCGTGGTGGTGGCGATTCTGGCATACTTCCTTCTTTTCAGCGGATTCTTCATAAGCAGAGACAGGATGCCACTGTACTGGATATGGTTTCATTATATGTCGCTGGTGAAGTACCCGTACGAGGGAGTGTTGCAGAACGAGTTCGGGATGGAGCCACCGAGGTGTTTTGTAAGGGGGACACAAATGTTTGACAACACGCCATTGGGGGAGGTGACGACGAATTTGAAGGTGGAATTGCTGAAGAGCATGAGCAAGACATTGGGAGTGAGCATAAACAGCGAAACGTGCGTGACCACTGGGGCGGATGTACTGAGGCAGCAGGGGATCACGGAGCTGGGGAAATGGAGCTGCTTCTGGGTGACAGTCGCTTGGGGATTTTTCTTCAGGTTTTTGTTCTACTTGGCGTTAGTGTTTGGAAGCAAGAACAAGAGGAGTTAA 2157 0.541 MSSTGLPFFNPSQLELLHLPHPHVSGPTLGELLKRVDDAQNDTPPHRILHLPPPPSSYPFILSFNSLTYSVKVRRKMTLPPNHVVSEQSSATKGTKILLNNISGEARDGQIMGVLGASGSGKSTLIDALADRISKDSLKGSVTLNGEALESRLLKVISAYVMQDDLLFPMLTVEETLMFSAEFRLPRSLSASKKKARVQALIDQLGLQNAAKTVIGDEGHRGVSGGERRRVSIGIDIIHDPIILFLDEPTSGLDSTSAFMVVKVLQRIAQSGSIVVMSIHQPSYRILGLLDRLIFLSRGQTVYTGSPANLPRFFLEFGHPIPDKENRTEFALDLIRELEESPGGTQSLVEFNKSWQLIAAKSKPATNRFFTGTLMDAIAASISRGKLVCGAPHSSNVATSSVPTYANPFWMEMMVIAKRSVTNSRRMPELFGIRLGAVLVTGGILATIFWHLDDTPKGVQERLGFFAFAMSTTFYTCAEAFPVFLQERYIFMRETAYNAYRRWSYVLAHSIISIPSLAILSLAFAATTFWSVGLAGGSSGFLFYFLVMFASFWAGSSFVTFLSGIVSHVMLGFTVVVAILAYFLLFSGFFISRDRMPLYWIWFHYMSLVKYPYEGVLQNEFGMEPPRCFVRGTQMFDNTPLGEVTTNLKVELLKSMSKTLGVSINSETCVTTGADVLRQQGITELGKWSCFWVTVAWGFFFRFLFYLALVFGSKNKRS 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1852g0001 718 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 47 706 - -
Prci1852g0001 718 Pfam ABC transporter 99 251 IPR003439 GO:0005524
Prci1852g0001 718 Gene3D - 85 313 IPR027417 -
Prci1852g0001 718 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 90 312 IPR027417 -
Prci1852g0001 718 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 84 323 IPR003439 GO:0005524
Prci1852g0001 718 SMART AAA_5 108 393 IPR003593 GO:0016887
Prci1852g0001 718 Pfam ABC-2 type transporter 280 357 IPR043926 GO:0140359
Prci1852g0001 718 ProSitePatterns ABC transporters family signature. 223 237 IPR017871 GO:0005524|GO:0016887
Prci1852g0001 718 FunFam ABC transporter G family member 6 87 314 - -
Prci1852g0001 718 Pfam ABC-2 type transporter 413 621 IPR013525 GO:0016020|GO:0140359
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1852g0001 98 283 Calmodulin-binding Proteins AT2G36910 29.630 9.76e-11 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1852g0001 K05681 - gmx:100803426 1050.81