Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci184g0001 ATGAAGGAGAGGCAACGTTGGACAGCTGAAGAGGATGCTTTATTGCGTGCTTACGTCAAAGAGTATGGCCCTCGGGAATGGAATCTTGTGTCCCAACGAATGAACAAACCCCTTAATAGGGATGCCAAATCCTGCTTAGAAAGGTGGAAAAACTACCTCAAGCCTGGCATCAAGAAGGGGTCTCTTACCGAAGAAGAGAAATCTCTTGTCATCCACCTTCAACAGATTTACGGCAACAAATGGAAGAAAATTGCTGCAGAAGTCCCTGGTCGCACTGCCAAGAGGTTAGGTAAGTGGTGGGAAGTATTTAAAGAGAAGCAGCAGAGAGAGAAAAAAGACATCAACAAAACAGTTGATCCAATTGACGACACCAAATACGATCACATCCTTGAGACCTTTGCTGAGAAGCTTGTGAAAGAACGCCCTTCCCCATCCTACCTCATGGCTGCCTCCAATGGGGCATTTATTCTCACTGATGCACCAGCTCCTCCATCAGCTATGCTTCCTTCATGGCTTTCTAACTCTAGCGGCACTTCAGCTATTAGGCCACCCTCCCCTTCTGTGACGCTAAGTCTCTCTCCCTCCACTGTGGCTGCTTCATCTCCATTTCAATGGTTACAACCTGAGAGAATGCCAGAGAATGCTCCTCCTGTTATTCAGAATGCAACACCTCATGGAACTATTTCAGGTTTTGGTGATAACATGCTTGTATCTGAGCTTTTTGAATACTGTAAAGAGCTGGAAGAAGGTCACCGGACATGGTCATCACATAGGAAGGAAGCAGTGTGGAGGTTAAGGCGGGTGGAGCTGCAGTTGGAGTCAGAGAAGGCATGTCGTATGCGAGAGAAGATGGAAGAGTTTGAAGTGAAGATTAAAGCTCTCTGGGAAGAACAGATGGCTGCTTTGGATAGAATGGAAGCCGAATACCGGGAGCAACTATCTGAACTGAGAAGAGATGCAGAAACCAAGGGGCAGAAATTGACTGAGCAATTAGCTGCTAAACACTCAAGGCTTAGTAAGCTTCTGGAGCAGATAGGTTGCAGACCCAGGCTTGCTCAGCCTAATGTAAGATGA 1074 0.4665 MKERQRWTAEEDALLRAYVKEYGPREWNLVSQRMNKPLNRDAKSCLERWKNYLKPGIKKGSLTEEEKSLVIHLQQIYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQREKKDINKTVDPIDDTKYDHILETFAEKLVKERPSPSYLMAASNGAFILTDAPAPPSAMLPSWLSNSSGTSAIRPPSPSVTLSLSPSTVAASSPFQWLQPERMPENAPPVIQNATPHGTISGFGDNMLVSELFEYCKELEEGHRTWSSHRKEAVWRLRRVELQLESEKACRMREKMEEFEVKIKALWEEQMAALDRMEAEYREQLSELRRDAETKGQKLTEQLAAKHSRLSKLLEQIGCRPRLAQPNVR 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci184g0001 357 ProSiteProfiles Myb-like domain profile. 54 104 IPR001005 -
Prci184g0001 357 SMART sant 58 106 IPR001005 -
Prci184g0001 357 SMART sant 3 55 IPR001005 -
Prci184g0001 357 Gene3D - 62 120 - -
Prci184g0001 357 PANTHER PROTEIN ROUGH SHEATH 2 HOMOLOG 1 352 - -
Prci184g0001 357 SUPERFAMILY Homeodomain-like 4 98 IPR009057 -
Prci184g0001 357 ProSiteProfiles Myb-like domain profile. 1 53 IPR001005 -
Prci184g0001 357 Gene3D - 4 58 - -
Prci184g0001 357 CDD SANT 6 53 IPR001005 -
Prci184g0001 357 Coils Coil 292 330 - -
Prci184g0001 357 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 57 IPR017930 -
Prci184g0001 357 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 108 IPR017930 -
Prci184g0001 357 CDD SANT 63 104 IPR001005 -
Prci184g0001 357 Pfam Myb-like DNA-binding domain 7 69 - -
Prci184g0001 357 FunFam MYB-related transcription factor 4 58 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci184g0001 1 348 MYB Transcription Factor Family AT2G37630 63.187 6.73e-153 433
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci184g0001 Myb_DNA-bind_6 1.2e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci184g0001 K09422 - qsa:O6P43_016767 549.28