Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1834g0003 ATGGCCCTCAAATTGAATGTCGTGCTTGTCATGTCTTTGGCCATCACAAGTCTGGTCTACGTAGCATCTGCCTCTTCTGGCACCGCCACATTTTACACTAAATTACGTCCATCTGCATGCTTTGAAAGCCATGACGAGGGAACAATGGTGGCAGCGGCGAGCGACTCTATCTGGGACCATGGAAAAGCATGTGGAAGAAAGTACAGAGTGAGGTGCACCGGTGGTACCAGCGGCGGTCTGGCTCACCCTTGCCGGAGCAGAACCGTCACCGTCAAGATTGTCGATTTCTGCCCGAGATGCCAAGGAACCATCGATCTCTCTCATCAAGCTTTCTCTGCCATCGCTAACCCTGTCGAAGGAAAAATCCGCATTGACTTCACCCAGTAA 387 0.5168 MALKLNVVLVMSLAITSLVYVASASSGTATFYTKLRPSACFESHDEGTMVAAASDSIWDHGKACGRKYRVRCTGGTSGGLAHPCRSRTVTVKIVDFCPRCQGTIDLSHQAFSAIANPVEGKIRIDFTQ 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1834g0003 128 CDD DPBB_EG45-like 26 127 - -
Prci1834g0003 128 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 27 128 IPR007112 -
Prci1834g0003 128 Gene3D - 23 128 IPR036908 -
Prci1834g0003 128 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 1-RELATED 4 128 IPR044206 GO:0009627|GO:0048046
Prci1834g0003 128 Pfam Lytic transglycolase 51 125 IPR009009 -
Prci1834g0003 128 FunFam Barwin-related endoglucanase 24 128 - -
Prci1834g0003 128 SUPERFAMILY Barwin-like endoglucanases 14 127 IPR036908 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1834g0003 49 128 Expansin Gene Family AT2G45110 35.484 3.94e-08 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1834g0003 - - ahf:112743758 150.984