Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1805g0002 ATGGATCGTTCGGCCATCACAGTTGGGCCAGGAATGGATATGCCGATCATGCATGACAGCGATCGATATGAACTCGTGCGCGATATTGGGTCTGGCAATTTTGGGGTCGCAAGGCTTATGAGGGACAAGCAGACGGAGGAACTCGTTGCTGTGAAGTATATTGAGAGAGGTGATAAGATAGATGAAAATGTACAAAGGGAAATTATAAATCACCGGTCACTGAGGCATCCTAACATTGTCAGGTTTAGGGAGGTCATATTGACCCCATCACATTTAGCTATTGTAATGGAATATGCTTCTGGAGGGGAGCTATTTGAACGAATATGCAATGCAGGGCGGTTCAGTGAGGACGAGGCGCGGTTCTTCTTCCAACAGCTTATATCAGGGGTTAGCTATTGTCATGCAATGCAAGTATGCCATCGTGACTTGAAGTTGGAGAACACATTGCTAGATGGAAGTCCAGCTCCACGTTTGAAGATTTGTGATTTTGGATACTCAAAGTCGTCGGTGCTCCATTCACAACCAAAATCTACCGTTGGTACTCCTGCGTACATTGCTCCTGAAGTGTTGCTGAAGAAGGAATATGATGGCAAGATTGCAGACGTGTGGTCTTGTGGGGTAACTTTATATGTCATGTTGGTTGGTGCATATCCTTTTGAGGACCCTGATGAACCAAAAAACTTCCGCAAGACAATACATAGGATTTTGAATGTCCAGTACTCAATTCCTGACTATGTTCATATATCGCCTGAGTGTTGTCATCTGATATCAAGGATCTTTGTTGCTGACCCTTCACAGAGGATAACCATGCCTGATATTAGAAACCATGAGTGGTTTCTAAAGAATCTTCCAGCTGATCTCATGGACGAGGGGACAATGAACAATCAGTTTGAAGAGCCTGATCAACCGATGCAGAGCATTGAAGAAATCATGCAGATAATTTCTGAGGCTACAATTCCAGCAGCTGGCACTCAGTCTCTCAACCAGTATCTTACAGGTAGCTTGGATATCGATGATGACATGGACGAGGACCAGGAGACAGATCCTGACCTTGATATCGAGAGCAGTGGAGAGATAATCTATGCTATGTAA 1092 0.4441 MDRSAITVGPGMDMPIMHDSDRYELVRDIGSGNFGVARLMRDKQTEELVAVKYIERGDKIDENVQREIINHRSLRHPNIVRFREVILTPSHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPDEPKNFRKTIHRILNVQYSIPDYVHISPECCHLISRIFVADPSQRITMPDIRNHEWFLKNLPADLMDEGTMNNQFEEPDQPMQSIEEIMQIISEATIPAAGTQSLNQYLTGSLDIDDDMDEDQETDPDLDIESSGEIIYAM 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1805g0002 363 PANTHER SERINE/THREONINE KINASE 22 308 - -
Prci1805g0002 363 ProSitePatterns Protein kinases ATP-binding region signature. 29 52 IPR017441 GO:0005524
Prci1805g0002 363 CDD STKc_SnRK2-3 22 278 - -
Prci1805g0002 363 SUPERFAMILY Protein kinase-like (PK-like) 15 304 IPR011009 -
Prci1805g0002 363 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Prci1805g0002 363 ProSiteProfiles Protein kinase domain profile. 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1805g0002 363 SMART serkin_6 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1805g0002 363 FunFam Serine/threonine-protein kinase SRK2E 99 287 - -
Prci1805g0002 363 Pfam Protein kinase domain 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1805g0002 363 Gene3D Transferase(Phosphotransferase) domain 1 99 287 - -
Prci1805g0002 363 FunFam Serine/threonine-protein kinase SRK2E 14 98 - -
Prci1805g0002 363 Gene3D Phosphorylase Kinase; domain 1 1 98 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1805g0002 16 302 CBL-interacting serine-threonine protein kinases AT4G24400 41.528 1.53e-69 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Prci1805g0002 Pkinase 1e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1805g0002 K14498 - qsu:112032862 676.011