Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1804g0001 CTGCGTACTGCTGTATTCTCTAAGGTAGCATTGCGAACAATTCGATTAGTATCTAGAAAGGTGTTCTTACATTTGCATGAGCTTGACCTACGCTATCATCTAAGTCGAGAAACTGGAGCATTAAATAGAATAATTGATCGTGGTAGTCGTGCAATAAATTTTATACTTTCATCTATGGTGTTCAATGTAGTACCCACTATATTAGAGATATCTATGGTATCAGGTATACTGGCTTACAAATTTGGAGCACCTTTTGCATGGATCACATCCCTATCAGTAGCTGCTTATGTTGTTTTTACTCTGACTGTGACACAGTGGAGGACTAAATATAGGAAGGCCATGAATAAAGCTGACAATGATGCAAGTACCAGGGCAGTCGATTCACTCATTAATTACGAGACTGTCAAATATTTCAATAATGAAGATTTTGAAGGTGAAAAATATGATGAGTTCCTAAAGAGGTATGAAGATGCTGCTCTGAAAACACAACGCAGCCTTGCTTTTCTGAACTTTGGTCAAAATGTTATATTTAGCACTGCACTTTCTACGGCAATGTTGTGTTCTCATGGGATTATGAATGGCCAGATGACCGTTGGTGATTTGGTTATGGTGAATGGGCTCCTCTTCCAACTTTCTCTTCCACTCAATTTCCTTGGAAGTGTTTATCGTGAGACTATACAGAGTTTAGTTGACATGAAGTCAATGTTTCAGTTACTTGAGGAAAGAGCTGATGTTAGGGATAAAGACAATGCAAAGCCACTTGAATTAAATGGAGGGAGCATAGAGTTTGAAAATGTACACTTCAGTTACCTTGCAGAGAGAAAAATACTTGATGGAATATCTCTTGTTGTGCCAGCCGGAAAAAGTGTGGCAATTGTAGGAACTAGTGGCAGTGGTAAATCAACCATTCTTAGATTGATCTTCAGGTTTTTTGACCCTCATTCCGGAAGTATAAAGATAGATGGTCAAAATATCAAGGACGTAACCCTTGATAGTCTTCGGAAGTTTATCGGTGTTGTTCCGCAAGATACTGTACTTTTCAATGATACAATTTTTCACAATATCCATTATGGTAGACTTTCAGCAACGAAAGAGGAAGTCTATGAAGCTGCTCAAAAAGCCGCAATTCATGACACTATCATGAATTTTCCTGAGAAATATTCAACTGTTGTGGGAGAGCGAGGGCTCAAGTTAAGCGGTGGTGAGAAGCAACGTGTCGCCTTGGCTCGAGCGTTTTTGAAAGCACCTCCAGTTCTGTTATGCGATGAAGCTACGAGTGCACTTGACAGCACAACGGAAGCAGAGATATTAAATGCTTTGAAATCTTTGGCAAATAATCGCACTTCCATATTCGTTGCTCACAGGCTTACTACTGCAATGCAGTGTGATGAGATCATAGTGTTGGAAAATGGAAAGGTGGTTGAACAAGGACCACATGAACTGCTTTTATCCAAGGCAGGAAGATATGCACAACTTTGGGCACAGCAAAATAACACAGTTGATGCAGCGATGAAAGTTGAGGCATGA 1527 0.3988 LRTAVFSKVALRTIRLVSRKVFLHLHELDLRYHLSRETGALNRIIDRGSRAINFILSSMVFNVVPTILEISMVSGILAYKFGAPFAWITSLSVAAYVVFTLTVTQWRTKYRKAMNKADNDASTRAVDSLINYETVKYFNNEDFEGEKYDEFLKRYEDAALKTQRSLAFLNFGQNVIFSTALSTAMXLCSHGIMNGQMTVGDLVMVNGLLFQLSLPLNFLGSVYRETIQSLVDMKSMFQLLEERADVRDKDNAKPLELNGGSIEFENVHFSYLAERKILDGISLVVPAGKSVAIVGTSGSGKSTILRLIFRFFDPHSGSIKIDGQNIKDVTLDSLRKFIGVVPQDTVLFNDTIFHNIHYGRLSATKEEVYEAAQKAAIHDTIMNFPEKYSTVVGERGLKLSGGEKQRVALARAFLKAPPVLLCDEATSALDSTTEAEILNALKSLANNRTSIFVAHRLTTAMQCDEIIVLENGKVVEQGPHELLLSKAGRYAQLWAQQNNTVDAAMKVEA 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1804g0001 509 ProSitePatterns ABC transporters family signature. 399 413 IPR017871 GO:0005524|GO:0016887
Prci1804g0001 509 CDD ABCC_ATM1_transporter 262 497 - -
Prci1804g0001 509 SUPERFAMILY ABC transporter transmembrane region 1 241 IPR036640 GO:0005524|GO:0016020
Prci1804g0001 509 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 228 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci1804g0001 509 SMART AAA_5 287 473 IPR003593 GO:0016887
Prci1804g0001 509 Pfam ABC transporter transmembrane region 1 215 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci1804g0001 509 CDD ABC_6TM_ATM1_ABCB7 1 236 - -
Prci1804g0001 509 Gene3D ABC transporter type 1, transmembrane domain 1 252 IPR036640 GO:0005524|GO:0016020
Prci1804g0001 509 Gene3D - 253 508 IPR027417 -
Prci1804g0001 509 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 1 493 IPR039421 -
Prci1804g0001 509 FunFam ABC transporter B family member 25 254 508 - -
Prci1804g0001 509 Pfam ABC transporter 278 427 IPR003439 GO:0005524
Prci1804g0001 509 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 251 497 IPR027417 -
Prci1804g0001 509 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 262 496 IPR003439 GO:0005524
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1804g0001 98 505 Calmodulin-binding Proteins AT2G36910 36.038 6.20e-68 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1804g0001 K05662 - tcc:18591113 909.057