LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci1801g0001	ATGTCTCCTCCTGCAGCTTCTCAGCTTCTCCATTCCTCTCTTCATCAGGGAAATACGGACAGTAATCCACGCGAGTTATTGCTTGCCCATTCTCAAGCTTCATCCTCTTCTCCAACTGTTGTCGGCACGGATTCCCATATTGTAGAATGCAAAGACAGGCAAAAAGACTACCAAGAGGACGACGATTCCCTTTCGAGGCGGCCGTTATGGCGCGTAGTTCCCATCCCTTCAAACCTAATCAACCCATACCGAATAGTCATTGTGCTGCGTCTCATTATCCTAGTTTTCTTCTTCCGCTTCCGGTTTTTGAATCCAGTGCACGATGCATACCCCTTATGGCTAATTTCTGTAATCTGCGAGGTCTGGTTTGCTCTGTCTTGGATTCTTGACCAATTTCCCAAATGGTTTCCCATCACGCGCGAAACATACCTAGACCGCTTATGCATCAAGTTTGAGCGTAAAGAGCCAAACCGTCTAGCCCCAATTGATGTGTTTGTAACTACTGTAGACCCTTCAAAGGAAGCACCCATTGTAACTGCAAACACCGTTCTCTCAATCTTGTCTGTTGATTACCCTGTTGAGAAGGTCACCTGCTATGTCTCCGATGACGCTGCGTCTCTTGCTTTTAATACCCTATCTGAAACAGTTGAATTCGCAAGAACATGGGTTCCCTTCTGCAAGAAGTATGGCATTGAGCCACGGGCACCTGAGTTCTATTTCTCTCAGAAAGTTGATTACTTTAAAGATAAGGTGCACCCCGCATTTGTGAAGGAACGCAGGGCCATTAAGAGGGAGTATGAAGAATTCAAAGTGAAAATTAATGCATTGGTGGCAAAAGCTCAGAAAAAACCAGAGGAGGGGTGGGTGATGCAGAATGGTGTGCCATGGCCGGGGAACAATACTCACGATCATCCGGGAATTTGTCAGGTCTCTCTGGGAGGTGCTAGTACACTGGATGTTGAAGGTAAGGAATTGCCACGGCTAGTGTATGTTTCACGTGAAAATCGTCCTGGCTATCAACATCACAAAAAAGCTGGTGCCTTGAATGCTTTGGTTCGAGCTTCTGCTGTGCTTACAAATGCGCCTTTCTTATTGAATCTGGATTGTGACCAATACATCAACAATAGCAAGGTTATAAGGGAGGCTATGTGCTTTCTAATGGAGCCCCAAGGAAGGGACCTATGTTTTGTCCAATTTCCGTTACGTTTCGATGGCTTGGATGACCGTGATAGATATGCTAATCACAACACTGTTTTCTTTAATATCAACATGAAAAGCCTTGATGGCATTCAAGGTCCGGAATATGTTGGTGCTGGATGTGTATTTAATAGGTGGGCTTTATATGGCTATGATCCACAAATATCTAAGAGAAGCTCAAAGATGAATTGCGACTGGTGGCCTTTGTGGTGTCGTTGTTGTGGTGGTGGGCCTGATTCAGTGTTTGATCTTGAAGAGATTGATGAAAATCTTGAAGGCTGTGATGAACTAGAAATATTTGATCTTGAGGTTATGGAAGAATCGCTTGAAAGTTCTGACTTGGAAGAAATAATGGAAATACTTGATCTTGACGAGAGTGAAGAAGAGCTTGAAGGTTATGATGAGGCAGGGGAACTATCCCTCATATCACCAGAAAATTTTATGAAGCGATTTGGGCAGTCACCAATTTTTATTGCTTCCACTTTGGGTAGGGCTGGTGGAGTTCTAAAAAGTGTTAATGCTATGAAAGAGGCCATTCATGTTATATGTTGTGATTATGAAGAGAAAACAGAATGGGGCAAAGAGATTGGTTGGATTTATGGCTCAGTCACAGAAGGTATCTTGACTGGTTTTAAGATGCATTGTAGAGGATGGAAATCAGCGTACTGCATACCAAAAAGAGCAGCTTTCAAGGGATTTGCTCCAGTAAATCTATCAGATCAGTTATGCCAAGTTTTGAGATGGGCTTTTGGTTCTGTTGAGATATTCTTTAGTTACCATTGCCCTATGTGGTATGGCTACAAAGGAAAGTTGAGGTGGCTTCAGAGGCTAGCTTATACTAATACTATTGTTCACCCAATCACCTCCATTCCTTTGCTAATATACTGTACAATTCCAGCTGTCTGTCTTCTGACAGGGAAGTTCTTCATCCCAGCCCTGACAAATCTTGATAGCATTTGTTTGATGGCGCTTTTTATCTCCATCATCTTAACTTGTGTGCTAGAGCTTCGATGGAGTGGAGTTAGCATTCAGGATTGGTGGCACAATGAGCAACTCTGGATCATTGGAGGTGTTTCTTCACATTTGTTTGCTGTATTTCTAGGTCTGCTTAAAGTTGTTACTGGAGTAGATGCTGATTGTTTTGCACGGGCAAAAGCAAAAGGTGATACTCGCTTCTACCTCTTCAAATGGACTAATCTTCTCATCCCACCAACCACTCTTATAATCTTGAACGTTGTGGGAATTGTGGCCGGAATCTCAGATGCCGTCAACAATGGCTATGGCTCATGGGGACCCTTATTTGGTAAACTATTTTTAGCCTTCTGGGTTATTGCGCACCTACATCCTTTCCTCAAAGGTCTCATGGGCAAGAATAGGACTCCTACCATCGTTGTCCTCTGGTCACTACTTGTAGCATTAGTTTTGTCAATGCTTTGGGTTCGGATTGATCCATTTTTGCCCAAGAAAACGGGTCCAGTACTCGAACAATGTGGGGTAGAATGTTAA	2703	0.434	MSPPAASQLLHSSLHQGNTDSNPRELLLAHSQASSSSPTVVGTDSHIVECKDRQKDYQEDDDSLSRRPLWRVVPIPSNLINPYRIVIVLRLIILVFFFRFRFLNPVHDAYPLWLISVICEVWFALSWILDQFPKWFPITRETYLDRLCIKFERKEPNRLAPIDVFVTTVDPSKEAPIVTANTVLSILSVDYPVEKVTCYVSDDAASLXAFNTLSETVEFARTWVPFCKKYGIEPRAPEFYFSQKVDYFKDKVHPAFVKERRAIKREYEEFKVKINALVAKAQKKPEEGWVMQNGVPWPGNNTHDHPGICQVSLGGASTLDVEGKELPRLVYVSRENRPGYQHHKKAGALNALVRASAVLTNAPFLLNLDCDQYINNSKVIREAMCFLMEPQGRDLCFVQFPLRFDGLDDRDRYANHNTVFFNINMKSLDGIQGPEYVGAGCVFNRWALYGYDPQISKRSSKMNCDWWPLWCRCCGGGPDSVFDLEEIDENLEGCDELEIFDLEVMEESLESSDLEEIMEILDLDESEEELEGYDEAGELSLISPENFMKRFGQSPIFIASTLGRAGGVLKSVNAMKEAIHVICCDYEEKTEWGKEIGWIYGSVTEGILTGFKMHCRGWKSAYCIPKRAAFKGFAPVNLSDQLCQVLRWAFGSVEIFFSYHCPMWYGYKGKLRWLQRLAYTNTIVHPITSIPLLIYCTIPAVCLLTGKFFIPALTNLDSICLMALFISIILTCVLELRWSGVSIQDWWHNEQLWIIGGVSSHLFAVFLGLLKVVTGVDADCFARAKAKGDTRFYLFKWTNLLIPPTTLIILNVVGIVAGISDAVNNGYGSWGPLFGKLFLAFWVIAHLHPFLKGLMGKNRTPTIVVLWSLLVALVLSMLWVRIDPFLPKKTGPVLEQCGVEC	901

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci1801g0001	901	Coils	Coil	260	280	-	-
	Prci1801g0001	901	Gene3D	Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A	312	456	IPR029044	-
	Prci1801g0001	901	PANTHER	X-BOX TRANSCRIPTION FACTOR-RELATED	67	865	-	-
	Prci1801g0001	901	MobiDBLite	consensus disorder prediction	1	41	-	-
	Prci1801g0001	901	Pfam	Cellulose synthase	162	894	IPR005150	GO:0016020\|GO:0016760\|GO:0030244

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci1801g0001	65	901	Cell Wall Biosynthesis	AT5G17420	63.636	0.0	1116

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci1801g0001	K10999		-	nnu:104600956	1263.44