Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci17g0025 ATGAAAAAGCAATTTTATACGTATATTAGTAAATATAAAAAAATCAAAATGGAATTCTCTGTAAGAGCTGCGGAACTAGCAAGTCTATTAGAAAGTAGAATTAGCAACTTTGTCACGAGTTTTCAATTGGATGAGATCGGTCGAGTGGTATCCGTTGGAGATGGTATTGCACGTGTTTATGGATTGAACGAGATTCAAGCTGGGGAAATGGTGGAATTTGCCAGCGGTGTCAAAGGAATAGCCTTGAATCTTGAGAATGAGAATGTGGGAATAGTTGTCTTTGGTAGTGATACCGCTATTAAAGAAGGGGATCTTGTCAAACGCACTGGATCTATTGTGGATGTTCCTGCAGGAAAGGCTATGCTAGGGCGTGTGGTCGACGCCTTGGGGGTACCTATAGATGGAAGAGGGGCTCTAAGCGATCACGAGCGAAGACGTGTCGAAGTGAAAGCCCCTGGGATTATTGAACGTAAATCTGTGCACGAGCCTATGCAAACAGGGTTAAAAGCGGTAGATAGCCTGGTTCCTATAGGCCGTGGTCAACGAGAACTTATAATCGGGGACCGACAAACTGGAAAAACTGCTATTGCTATCGATACCATATTAAACCAAAAGCAAATGAACTCAAGGGCCACCTCTGAGAGTGAGACATTGTATTGTGTCTATGTAGCGATTGGACAGAAACGCTCAACTGTGGCACAATTAGTTCAAATTCTTTCAGAAGCGAATGCTTTAGAATATTCCATTCTTGTCGCAGCCACCGCTTCGGATCCTGCTCCTCTGCAATTTCTGGCCCCATATTCTGGGTGTGCCATGGGGGAATATTTCCGCGATAATGGAATGCACGCATTAATAATCTATGATGATCTTAGTAAACAGGCCGTGGCATATCGACAAATGTCATTATTGTTACGCCGACCACCAGGCCGTGAGGCTTTCCCAGGCGATGTTTTCTATTTACATTCCCGTCTCTTAGAAAGAGCCGCTAAACGATCGGACCAGACAGGTGCAGGTAGCTTGACCGCCTTACCCGTCATTGAAACACAAGCTGGAGACGTATCGGCCTATATTCCCACCAATGTGATCCCCATTACTGATGGACAAATCTGTTCGGAAACAGAGCTCTTTTATCGCGGAATTAGACCCGCTATTAACGTCGGCTTATCTGTCAGTCGCGTCGGGTCTGCCGCTCAGTTGAAAGCTATGAAACAAGTCTGCGGTAGCTCAAAACTGGAATTGGCACAATATCGCGAAGTGGCCGCCTTTGCTCAATTTGGGTCAGACCTTGATGCTGCGACTCAGGCATTACTCAATAGAGGTGCAAGGCTTACAGAAGTACCGAAACAACCACAATATGCACCACTTCCAATTGAAAAAGAAATTTTAGTCATTTATGCAGCTGTCAATGGATTCTGTGATCGAATGCCATTAGACAGAATTTCTCAATATGAGAGAGCCATTCCAAGTAATATAAAACCGGAATTACTACAATCCCTGAAAGGTGGATTAACTAACGAAAGAAAGATAGAACCAGATAAATTCTTATCAGAACAAGCCCTTTCTTACATATGA 1572 0.4389 MKKQFYTYISKYKKIKMEFSVRAAELASLLESRISNFVTSFQLDEIGRVVSVGDGIARVYGLNEIQAGEMVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHERRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVPKQPQYAPLPIEKEILVIYAAVNGFCDRMPLDRISQYERAIPSNIKPELLQSLKGGLTNERKIEPDKFLSEQALSYI 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci17g0025 523 Gene3D - 399 522 IPR038376 -
Prci17g0025 523 CDD ATP-synt_F1_alpha_C 402 506 IPR000793 GO:0015986
Prci17g0025 523 FunFam ATP synthase subunit alpha 399 522 - -
Prci17g0025 523 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 167 391 IPR000194 GO:0005524
Prci17g0025 523 NCBIfam F0F1 ATP synthase subunit alpha 21 497 IPR005294 GO:0015986|GO:0045261|GO:0046933
Prci17g0025 523 PANTHER ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL 14 519 IPR005294 GO:0015986|GO:0045261|GO:0046933
Prci17g0025 523 ProSitePatterns ATP synthase alpha and beta subunits signature. 382 391 IPR020003 GO:0005524
Prci17g0025 523 Gene3D - 20 111 IPR023366 -
Prci17g0025 523 FunFam ATP synthase subunit alpha, mitochondrial 112 398 - -
Prci17g0025 523 Pfam ATP synthase alpha/beta chain, C terminal domain 398 495 IPR000793 GO:0015986
Prci17g0025 523 Gene3D - 112 398 IPR027417 -
Prci17g0025 523 CDD ATP-synt_F1_alpha_N 45 110 - -
Prci17g0025 523 FunFam ATP synthase subunit alpha 19 111 - -
Prci17g0025 523 Pfam ATP synthase alpha/beta family, beta-barrel domain 45 110 IPR004100 GO:0046034|GO:1902600
Prci17g0025 523 SUPERFAMILY C-terminal domain of alpha and beta subunits of F1 ATP synthase 400 497 - -
Prci17g0025 523 PIRSF F_ATPase_subunit_alpha 19 519 IPR005294 GO:0015986|GO:0045261|GO:0046933
Prci17g0025 523 Hamap ATP synthase subunit alpha [atpA]. 19 523 IPR005294 GO:0015986|GO:0045261|GO:0046933
Prci17g0025 523 CDD F1-ATPase_alpha_CD 112 394 IPR033732 GO:0032559
Prci17g0025 523 SUPERFAMILY N-terminal domain of alpha and beta subunits of F1 ATP synthase 28 112 IPR036121 GO:0046034|GO:1902600
Prci17g0025 523 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 114 397 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci17g0025 78 397 Primary Pumps ATPases(2) AT4G38510 26.444 2.22e-24 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci17g0025 K02132 - zju:27215249 939.873