Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1798g0001 ATGCCTCCTAGGAAGAAACCCAGCTCTTCTAAGAAATCGAATCTGAGCAGCCAGGCTCAGCCTTCTAAGTTCGGCATTCAACATTTTTTTGAGCGCCACACCCAGAATGCTCTTGTGGCCTCTCAGAAGCAGCCAAAAAATGATCCAGCTGCGAACCGTCCCATTTCTGCTCCCCAAGATTCCAAGTCTGTTGCATCTCCTAACTCTCATATTCCACCTGTTGCTGGGTCGCAAGCTGTCGCTCCAAACAATTTAGATTCCGTTCTTGCTAGAGCTGAAAGTAAATTGAACTCAGACTTGGCTGGGCCAAAAATTGAGAATTCAGAATCGCAAAAGCGTAAAGACACCCCGCAAGTTGGAGCAAATGAATACAATAACGTTTCGCAGAATACTCCTTCAGAGAATTTGTTAATACCAGGGTTTGATGCTGTGGAAAATCTCCCTGAGGCGTCTCCGGAAATTTCCAAGATTGTGCCTCATAAGCGCTTTAAGTTCTCGCCTGGGATGTTAATAAAACAGAGCCAGGATGATGGGGTTGATGAAGTCACATGGAAGATATCTCCTGTGAATGAAAGACTTCAAGCAGTTTCAAAACACATGCCTCAGATGATTCAGGCTTTGGCTGAATCTTCTAGAATCAACTTATTGCCCGTTGGGATTTCCTCAGAGAATCAGACTTCTCTGACTAAAGGTGGCAAATTTGAAAAGATACTTGCTTCACCATCTACAAAGGCTGCTGAGAGGTCAACAGTGTTGAAGAATGAAAAAGGCTTGAAACGTATAAACGCAGACCAAGACATGGTTTTTAACGTCAGTTCAACTGCTGTGAATGGTTCTGGAGTAATTACTGTACAGAGCCCCTTCCGAACTCCGCCATCTCTATCCTATTGCTCTGATAAGGTGCAGCTTGTCAGGGATGTTGAGCACAATGGACTATCTGACCAGCTTTATTTAAGACAGCATAAAAAGGCATTGCTTGAACTGTTAGATCAAGTCGAAGATGCCATTTGTGTTGAAGATGCTACAATCTGTGATAAAAGTGCAAATTACATTAAGTCTCAAGATGGAATTGCTGATAATCTGCCCATCAGAGTTGACTCTGCAGCAGAAAGCACTAGAATTCATAAGCCCAAAGAGGCCCTTGGTGGGTCCAGTTCTAATTATTTGGTCTTGGAGGTATCTGAAAAACATAGTCTTGCTAATTCATCTGCTTTGCAAGGCCCATACAAGGTGCTTCGTTTAATAAATGAACAAACTGGAGAAGAGAAGGCTGCAAACTTGTTGGAAGAGTGGTCTTACAGTGTTGTTGCACCCGGAGATACTGTGAATATAATTGGTCAATTTGATGATTGGGGGCATTGTGATGTAGATCATGATAATAATTTTTTGATTGTACACCCAGATATTCTGGTGTCTGGGTCTCGGGTAGCTGCTAGTTTTACTTGTCCAAGGAGAACTGTCTTAGATGAGAGGCTAAAATGTAATGAGCACTCAATTGCTGCATTAACTGGAACCTTACTTCACCAAATTTTTCAGGCTGGACTTATCAAGGATAGTCCTTCAATAAACTTCTTAGAGGAATATGCACGATTGGTACTCCAGAGAAACATTGAAAGCTTGTATGCATGTGGAGTAAATGAAAATGATGTGCACAAAACCTTGATAGACGCCATTCCACGAATATTAAATTGGATCAAACTGTTCAAGAATTCAGAGGAAAAGAGAGATGCTTATGTTGATTTTGGATGTGATGATGGGATAAAGAAAGTCAAAGTATCGGAGGTGCTTGATATTGAGGAAATGGCATGGGCTCCTCAGTATGGTTTGAAAGGGATGATTGATGCTTCTGTCAGTGTGAAAGTTCTACCTAAGGGAAATGAATCAGATGAAAAGGTCATGCCATTAGAGTTCAAAACTGGGAAAGCAATGTCTGGCCAGTCATCTATAGAACATCGTGCCCAAGTGATCTTGTACACTCTTCTGATGTCAGAAAGGTACCTAAAGACTATCGATTCTGGTCTTCTATATTATCTCCAGTCAGATCAGACGGAGGGTATTGTTGTTCAAAGATCTGACTTAGTTGGGCTAATCATGCGACGTAATGAGCTTGCAAGTGATATTCTGAAAGCATTAACCACTCAACAACTGCCTCCAATGTTACAGAGTCTGAGCATTTGCCGAGGTTGTCGCCATCTTAATGTTTGTAGCATTTATCACAAGGTACAAGGAGGAAGTGCAATGAGTAGTGGATTGGGAGATGTGTTTGATTCACATACTAATCACCTTTCATCTACTTATTGTAAGTTCCTCTGCCATTGGGATTGGCTGATTGACTTAGAAGCAAAAGAGACTGAGTTTGTAAAGAAAGAGATGTGGCGATCACATGCTTTTAAAAGTCAGAACAGTACTGGCCTTTCTTCTGTCATCCTTGATGCTTCAAATAATATTCCACATCAGAAATCTCTTAAAGATAATTGTTTCATTTATCGTTTTGTACGATGTGGTCCATCTTCCCTATCTGAAGATGGCGATCCTTCTAAAGCTACAGCAAATTATTTAGATCTGAAACTAAGAAGTGGAGACTATGTGATATTGAGCACTGAATCTAGCCGTCAAGCTATTGCCAGTGGGGTGATTACAGATATTAGTCATGCCCATGTTTCTGTTTCCTTTTCAAAGCGCCTGCGGATTCCTGGAAGCACCTCCACTAGCCAAGATCTCTATAAACAGGTTTGGAGAATTGATAAGGATGAAGGTGTGACTTCATTTGCTATTATGAGGTTTAATCTAGTACAGCTTTTTCTGCAAAATGCTCGAAGTACTCATCTGAGGAAAATGATTGTTGATCTTGAGGCTCCTAAATTTGACAGTGGATCTGTGCTCAGTCAGGACCCAGCAATATCATATGTGTGGTCAGAGAAGAGTTTGAATGATGATCAGCGTAGATCAATCCTCAAGATTCTTACTGCAAAGGACTACGCACTCATATTAGGAATGCCCGGAACAGGAAAGACATCAACTATGGTTCATGCTGTGAAAGCATTATTAATCAGAGGCACAACTATTTTGCTGACAGCTTATACAAACTCAGCTGTAGATAATTTACTTATCAAATTAAAAGCTCAGGGAATTGATTTTGTCCGTATTGGAAGACATGAAGCTGTGCATGAGGAGGTTAGAGGACACTGCCTTTCAGCAACAAATGTACAAAATGTTGATGAGATCAAAGTAAGGTTAGAACAAGTTAAAGTAGTTGCAGTTACATGTCTGGGCATCACCAGTCCCTTGCTTGCCAACAGGACTTTTGATGTATGCGTTATGGACGAAGCTGGGCAGACAACTCTACCAGTGTCCTTGGGCCCTCTCATGTTTTCCTCAATGTTTGTACTTGTGGGTGATCACTATCAACTTCCTCCGCTCGTCCAGAGGCTCGAGAGAATGGTCTGGGGATAA 3453 0.4147 MPPRKKPSSSKKSNLSSQAQPSKFGIQHFFERHTQNALVASQKQPKNDPAANRPISAPQDSKSVASPNSHIPPVAGSQAVAPNNLDSVLARAESKLNSDLAGPKIENSESQKRKDTPQVGANEYNNVSQNTPSENLLIPGFDAVENLPEASPEISKIVPHKRFKFSPGMLIKQSQDDGVDEVTWKISPVNERLQAVSKHMPQMIQALAESSRINLLPVGISSENQTSLTKGGKFEKILASPSTKAAERSTVLKNEKGLKRINADQDMVFNVSSTAVNGSGVITVQSPFRTPPSLSYCSDKVQLVRDVEHNGLSDQLYLRQHKKALLELLDQVEDAICVEDATICDKSANYIKSQDGIADNLPIRVDSAAESTRIHKPKEALGGSSSNYLVLEVSEKHSLANSSALQGPYKVLRLINEQTGEEKAANLLEEWSYSVVAPGDTVNIIGQFDDWGHCDVDHDNNFLIVHPDILVSGSRVAASFTCPRRTVLDERLKCNEHSIAALTGTLLHQIFQAGLIKDSPSINFLEEYARLVLQRNIESLYACGVNENDVHKTLIDAIPRILNWIKLFKNSEEKRDAYVDFGCDDGIKKVKVSEVLDIEEMAWAPQYGLKGMIDASVSVKVLPKGNESDEKVMPLEFKTGKAMSGQSSIEHRAQVILYTLLMSERYLKTIDSGLLYYLQSDQTEGIVVQRSDLVGLIMRRNELASDILKALTTQQLPPMLQSLSICRGCRHLNVCSIYHKVQGGSAMSSGLGDVFDSHTNHLSSTYCKFLCHWDWLIDLEAKETEFVKKEMWRSHAFKSQNSTGLSSVILDASNNIPHQKSLKDNCFIYRFVRCGPSSLSEDGDPSKATANYLDLKLRSGDYVILSTESSRQAIASGVITDISHAHVSVSFSKRLRIPGSTSTSQDLYKQVWRIDKDEGVTSFAIMRFNLVQLFLQNARSTHLRKMIVDLEAPKFDSGSVLSQDPAISYVWSEKSLNDDQRRSILKILTAKDYALILGMPGTGKTSTMVHAVKALLIRGTTILLTAYTNSAVDNLLIKLKAQGIDFVRIGRHEAVHEEVRGHCLSATNVQNVDEIKVRLEQVKVVAVTCLGITSPLLANRTFDVCVMDEAGQTTLPVSLGPLMFSSMFVLVGDHYQLPPLVQRLERMVWG 1150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1798g0001 1150 MobiDBLite consensus disorder prediction 34 73 - -
Prci1798g0001 1150 MobiDBLite consensus disorder prediction 1 79 - -
Prci1798g0001 1150 MobiDBLite consensus disorder prediction 99 134 - -
Prci1798g0001 1150 Gene3D - 904 1072 IPR027417 -
Prci1798g0001 1150 Gene3D - 1073 1148 IPR027417 -
Prci1798g0001 1150 MobiDBLite consensus disorder prediction 7 24 - -
Prci1798g0001 1150 CDD DEXXQc_DNA2 975 1142 IPR026851 GO:0017116
Prci1798g0001 1150 FunFam DNA replication ATP-dependent helicase/nuclease DNA2 918 1067 - -
Prci1798g0001 1150 Pfam Domain of unknown function DUF83 627 736 IPR022765 -
Prci1798g0001 1150 MobiDBLite consensus disorder prediction 114 134 - -
Prci1798g0001 1150 Pfam AAA domain 1079 1141 IPR041677 GO:0004386
Prci1798g0001 1150 Pfam AAA domain 976 1066 IPR041677 GO:0004386
Prci1798g0001 1150 CDD DNA2_N-like 472 707 - -
Prci1798g0001 1150 PANTHER DNA2/NAM7 HELICASE FAMILY 150 1142 IPR045055 -
Prci1798g0001 1150 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 972 1140 IPR027417 -
Prci1798g0001 1150 FunFam DNA replication helicase Dna2 582 736 - -
Prci1798g0001 1150 Gene3D - 472 736 IPR011604 -
Prci1798g0001 1150 Pfam DNA replication factor Dna2 417 619 IPR014808 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1798g0001 1 1117 Core DNA Replication Machinery Family AT1G08840 54.938 0.0 1122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1798g0001 K10742 - qsa:O6P43_017137 1470.29