Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci177g0008 ATGATGAACCATCAAGGAGGAATGAGTCACTTGAATTGTAATGCTAACAACCAAAGCAAGGTCAATCATCAGCTCATTCAAGCATCGGAATTGATACCTACTGCAAGTTCCTTTACTGCAGGTGATCATAGGTTCCCTGATCAGGTTTCGCGGTCAAATCATGCCGGTTATAATGAGAGTTTAAATAATTTTCCAAATAATGATCGCAGTGCTGCTGCTTTTCCTCATGAATCATCTGAAGTGTTGAGGTTTTCTCCTTTAACTTCCCTATCTGGAAATGTTAGAAGGTTCCCAGATGGGCTTTCTGGATCAAGTGACCTCCACTCTCAAGCAAGTAATAGTATTATTCCAAGCATTGGTCACAGTGCTGTTGTTGTTCCTCAAAATGTTGACTCAGGTGCAGAATATGCTGGGAACAATTATTATAACGATTTGAATTTGTCACTAAGTCTCGGCCCTCATTCATCTGAACAAGAAAATCAGAATACCAGCAGCTCTTGCACAACTGTAATTGATCTTGGAAGATCAAGTTCTGCAGTGCAAGAGCAAGGTTTGGATAGCAGCTCAGTTAATATGAGGCGTTTATCCTGCAAGAGAAAGTCTTCTGAACATGCTATCAGAGAATTGTTAGTAGGTGAGAGTTCTAGCTCAGCTGCACAAACTGGATTTTCCAAGCGGTGGGCTTCTGAAGTCCATGGCAATAATGGGCTAAACATATGTACTCCTTGTACTAGCCCTGTTAGTCATCAAGAACGGTCTGAGACCATTATTGGTCATAGTCCTATAGGGCCAGTTTCTGACGTTCAGCATTTGAATGGAGCTAGACTATCTGAAAACTTCCGAAGTAACATTCATCTTCATACAACTGCAAGTCAACAAACTTTTCTACCAACCAGCATTTTGTCATCAGGTTACAGGAGGGATACTCATATCCAGTTACCCAGTCAGTCACCTTTGTATGGCCAAGTCAACCATCCTCCATTCTTCAGATCTGCAGAAAGTTCTATTAATCCACTTTTCTCAGTGCAGCCTGATGGGCATGTTCCTATTTTTCATGAAACTCCACAGGCTACCCCCTGGATTAACATGATGAGACCAAGTAGTGTTTTTTCTTCATTTTTGCCTGTCAATGCTACAGTGGAAAGTGATGCTGTGGCACCCTTTCATTACCCAAGACACATAACTGAAAACATTATGCTTAGCCGCCAAATTGGAGTGAGAAATTGGGTACATGATGCAAGAAACTCACATTTTGTTAATGGAGCTGCCAACTTCCATGGAGATTTTTTCTGCCCTCTTCATGGTTGTGTTTCTGGTATAATTCATTCAGAAAATGCCCCTACTTGGTTCTCAGGGTTCAGTTTTGCTGATCGTTACATGCAGACACCATCAAGAATTGTGAATCACCCTGTGCTTGCAACTACTGGTTTCCCTTGGCTCAGTCACAGCCCAGCAGATTCAGATCTTTCAGCTGTCTTACAGGAACTGCGCTTTGCTGTTGGATTTGTTAATACCGTATCTCAGAATCAGCATGCATCAGGAGCAAGATCTGAGAATCATGCTGCTTTTAATTTTACATGGTCACTTGCTAATGCTCGAAATAGAATGAGGCTGAGGCCTGAGAATCTGCATGCATCAGAAGCAAGACCCGAGAATCAAGATGATAGCTATTATGATCACCTTTATCATTCGTTTTGGTCGCCAGCTAATGCTGCAAACAGAAGGAGGCTGAGTATTGAGCTTCACCATAGGCTGGCACATATGCGCAGTGAAGACCCCTTGCAGCCTGTGATGATTCCACTGGAATTGAGGATGTTGGACCATTCAATTATAATGGATATCCTTCAGGAGCATGCCAATGTAGATGGGCTGCATTTTGATTTAGACGACTGGACAAATGAGGATCTTGCGGCCCTAGCAGAGCCTATTGAGGCGGGCCTGAGTGAGGAAATGATTCTCAGCCACCTTAGGCAGGAAAAATTCCATCTCATCCCAGCTGGGTCTGAGGAAAGCGAATGCTGCTGCATATGTCAGGAGGAGTACCGTGAAAATGAAGATCTGGGCAAGCTGTGCTGTGCCCACAGATTTCATGTAGACTGTATCAAGCCATGGCTCGAGCTGAAGAACATCTGCCCCATTTGCAAACAAGTCGCACTTCCTCTTTTTCTTGATTCTCCTTAA 2181 0.4324 MMNHQGGMSHLNCNANNQSKVNHQLIQASELIPTASSFTAGDHRFPDQVSRSNHAGYNESLNNFPNNDRSAAAFPHESSEVLRFSPLTSLSGNVRRFPDGLSGSSDLHSQASNSIIPSIGHSAVVVPQNVDSGAEYAGNNYYNDLNLSLSLGPHSSEQENQNTSSSCTTVIDLGRSSSAVQEQGLDSSSVNMRRLSCKRKSSEHAIRELLVGESSSSAAQTGFSKRWASEVHGNNGLNICTPCTSPVSHQERSETIIGHSPIGPVSDVQHLNGARLSENFRSNIHLHTTASQQTFLPTSILSSGYRRDTHIQLPSQSPLYGQVNHPPFFRSAESSINPLFSVQPDGHVPIFHETPQATPWINMMRPSSVFSSFLPVNATVESDAVAPFHYPRHITENIMLSRQIGVRNWVHDARNSHFVNGAANFHGDFFCPLHGCVSGIIHSENAPTWFSGFSFADRYMQTPSRIVNHPVLATTGFPWLSHSPADSDLSAVLQELRFAVGFVNTVSQNQHASGARSENHAAFNFTWSLANARNRMRLRPENLHASEARPENQDDSYYDHLYHSFWSPANAANRRRLSIELHHRLAHMRSEDPLQPVMIPLELRMLDHSIIMDILQEHANVDGLHFDLDDWTNEDLAALAEPIEAGLSEEMILSHLRQEKFHLIPAGSEESECCCICQEEYRENEDLGKLCCAHRFHVDCIKPWLELKNICPICKQVALPLFLDSP 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci177g0008 726 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 641 719 IPR013083 -
Prci177g0008 726 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 166 719 IPR045191 GO:0061630
Prci177g0008 726 SUPERFAMILY RING/U-box 669 719 - -
Prci177g0008 726 Pfam Ring finger domain 674 715 IPR001841 -
Prci177g0008 726 ProSiteProfiles Zinc finger RING-type profile. 674 715 IPR001841 -
Prci177g0008 726 SMART ring_2 674 714 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci177g0008 560 719 C3H Transcription Factor Family AT2G15530 40.237 1.27e-23 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci177g0008 - - pcin:129295749 1476.07