Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1779g0002 ATGAATATCTTTTTTACTATTCCTAAAGCACTTCCAAGATTTTGGCTATCCTTTCTTCTGCTCATCTCTTGTGTTCTCTTACAAGGCTATGGAGATGATGAGTCTGCAAAAGGAGACACTAAAGTTATACGTATTGGTGCAATTATTGATGTTAATTCTCGTATTGGTAAAGAACAGCAACTAGCCATGGAAATTGAAGCTCAAAACTACAATAAGACATCGAAGACTCACAAGCTGGCTCTCTATTTCCAGAACGCCACTAAGGAAGCCTTCAGAGTCACATCTCTCGCTGAAGAGTTAATTGAAATGAAGCAAGTAGAAGTAATTATAGGGATGCATACGTGGCAGGAAGCTGCTCTAGTGGCTGAAATTGGAAGTCAAGCTCAAGTTCCAATCATATCCTTTGCATCACCTGCAATTACCCCGCCATTGACACCGAAACGATGGCCTTATCTGGTAAGGCTAGCGAACAATGTGACTGCACAAGTAAAATGCATTGCAGGCATAGTGAATGCTTTCAGTTGGCAAAGAGTAGTAGTCGTATATGAAGATGACGGCTATGGTGGTGGAGACGACGGGATGTTATCACTCCTTTCTGAGGCCCTCCGAGACTTTGGTTCGCTAATAGAGTACCGTTTAGCTCTTCCACCAATATCTATTTTACCAGATCCAGGAGGGCTAATCAATGAGGAGCTGATTAAGTTGGTAAAGCAAAGTCAGTCTCGTGTTTTCATTGTTTTGCACTCATCCTTAGAAATGGTGACTCATTTTTTCAGAGAAAGTTCAAAGATGGGACTTGTGGATAGAGATTCAGCTTGGATAATCTCAGAGAGCATAACTAATTTGCTTGACTCTCTGGATAAGTCCGTTATTTCCTCCTATATGGGAGGGTCTTTAGGAATCAAGACACACTACTCAGAAAATAGCGGTGAGTATCAAGATTTTCGAGCTCAGTTCAGGAAAAAATTTCGTGCAAAAAATCCAGAGGAAGATAATAGTAACCCAGGATTTTATGCTTTGCAAGCATATGATAGCATCAAAGTTGTCATTCAAGCAGTAGAAAGAATGGAAAGGAACAATAGTAGCAGCACAGAGGCTTTGCTAAGAGAAATATTGTCTAGCAGTTTTCTAGGTCTAAGTGGGGAAATTCATTTTGAAGCAGGTCAGCTCTTGCAGAATCCTATCCTAAGGATGGTAAATGTAGTTGGGAAGAGTTATAAAGAAATAGACTTTTGGACTCAAGAAAATGGGTTCACCGCAAGCCTGCCTACAGGAAAAAGTGAAGAAAATGCTACTGCTAATACACAAAGTTTGGCCGGTGTAGTACAATGGCCAGGGAATTTGCAGAGAACTCCAAAAGGTTGGAATATGCCTATTAAGCGAAACCCATTGAAAATTGCAGTTCCAGGAAGAACTTCATTTTCAAAGTTTGTCAAGGTTGAATATGGAAAAAGTCCAGATCAGAATCAATACAGTGGATTCTGTATTGAGATTTTCAACAAGGTGCTAGATCTTTTGGAATATGATCTACCCTGA 1536 0.4017 MNIFFTIPKALPRFWLSFLLLISCVLLQGYGDDESAKGDTKVIRIGAIIDVNSRIGKEQQLAMEIEAQNYNKTSKTHKLALYFQNATKEAFRVTSLAEELIEMKQVEVIIGMHTWQEAALVAEIGSQAQVPIISFASPAITPPLTPKRWPYLVRLANNVTAQVKCIAGIVNAFSWQRVVVVYEDDGYGGGDDGMLSLLSEALRDFGSLIEYRLALPPISILPDPGGLINEELIKLVKQSQSRVFIVLHSSLEMVTHFFRESSKMGLVDRDSAWIISESITNLLDSLDKSVISSYMGGSLGIKTHYSENSGEYQDFRAQFRKKFRAKNPEEDNSNPGFYALQAYDSIKVVIQAVERMERNNSSSTEALLREILSSSFLGLSGEIHFEAGQLLQNPILRMVNVVGKSYKEIDFWTQENGFTASLPTGKSEENATANTQSLAGVVQWPGNLQRTPKGWNMPIKRNPLKIAVPGRTSFSKFVKVEYGKSPDQNQYSGFCIEIFNKVLDLLEYDLP 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1779g0002 511 SUPERFAMILY Periplasmic binding protein-like I 41 455 IPR028082 -
Prci1779g0002 511 Gene3D - 46 392 - -
Prci1779g0002 511 PANTHER OS06G0188250 PROTEIN 19 394 - -
Prci1779g0002 511 FunFam Glutamate receptor 162 333 - -
Prci1779g0002 511 Gene3D - 457 511 - -
Prci1779g0002 511 CDD PBP1_GABAb_receptor_plant 44 422 IPR044440 -
Prci1779g0002 511 Pfam Receptor family ligand binding region 61 400 IPR001828 -
Prci1779g0002 511 Gene3D - 158 416 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1779g0002 8 510 Ion Channels AT2G29120 28.733 1.35e-62 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1779g0002 - - pcin:129300880 972.23