Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1776g0001 ATGATGTCAATGCTCAGAAGAAAAAAGATCACCAATCTCTTTTCAAGCTCTATACTTTCCCAGTTAATTTCCCATGAATTCGGTTTGATTTCTCACTCAATGCACTCTCCTACATACCCTTCTTCTGATTTCCTCAAAACCCTGAACCCTTTTAGGCTTTTGCTATACCATGCATCGTATTCAACGCAGGCATCCAAATTTCCTGAGTATGAGATGCCTTCTGTTACCTGGGGCGTGATCCAGGGACGGAAAGAGAAACTTGTTTCGCGGGTAATCATATTTGATTATTTGAAGGGTTTGGGAGTCATTCCTGATGAATTGCATGACTTGGAGATTCCTTCCACTGTTGAGGTCATGAGGGAGCGTGTTGAGTTTCTTCAGAAGTTGGGCTTAACCATTGATGACATTAATGAGTATCCTTTGATGCTGGGTTGCAGTGTGAGGAAGAATATTATACCTGTATTGGGGTACTTAGAAAAAATTGGAATTCCAAGGTCAAAGCTCGGTGAATTCATAAAAATGTACCCACAAGTTTTACATGCAAGCGTGATTGTTGAGCTAGCTCCGGTTGTTAGGTTCCTAAGAGGACTTGATGTGGAGAAACAGGACATTGGATATGTGTTGCAAAAGTATCCTGAGCTTCTGGGGTTCAAGCTTGAGGGTACAATGAGTACTTCGGTGGCTTATCTTGTTAGTATTGGTGTCAATCCTAGAGATATTGGTCCCATGGTGACACAGTACCCATATTTTTTGGGAATGAGAGTGGGGACCGTGATTAAACCTCTGACTGATTACTTGGTCTCTTTAGGGCTGCCCAAGAAAATTATTGCTAGAATGTTGGAGAAGAGACCCTATATACTTGGCTACAATCTTGAGGAGACTGTTAAACCTAATGTGGATTGTCTGATTAGTTTTGGACTTAGGAAGGAATCACTGCCTTTAGTTATTGCTCAATATCCACCGATTCTTGGGCTGCCTCTCAAGGCTAAATTGTCTTCACAGCAGTACTTCCTCAGTTTGAAGCTTAAGATTGATCCTGAAGGATTTGCACAAGTGATAGAGAAAATGCCGCAGGTGGTCAGCCTTAATCAACATGTGATAATGAAACCAGTTGAATTCCTCCTTGCAAGGGCAATACCGTCGCATGATGTGGCCAATATGGTGATCAGATGTCCTCAATTAATAGCATCAAGAGTTGAGCTTATGAAGAACAGTTTTTACTTCTTCAAGAGTGAGATGGGGAGACCCATAAAAGAGCTTGTGGAGTTCCCAGAATACTTTACATATAGCCTGGAATCCCGGATCAAACCCAGATACCAGAAGTTGAAAAGCAAGGGGATAAGGTTTTCATTAAATTGGATGCTAAATTGTAGTGACCAGAGATTTGAAGAGAGATTACAAGGCAACTACATTGAAACTGAAAGTACAGGACCATCATTCTGTATGGGTGGGAAGTTAGCGCTACCAGGTAATGACAATGAGATGGTGTCAGATGAGGAAGAGGAGAGTGATGATGAAAAACTATATAGACGAACAGTTTCTCTTTAG 1548 0.4141 MMSMLRRKKITNLFSSSILSQLISHEFGLISHSMHSPTYPSSDFLKTLNPFRLLLYHASYSTQASKFPEYEMPSVTWGVIQGRKEKLVSRVIIFDYLKGLGVIPDELHDLEIPSTVEVMRERVEFLQKLGLTIDDINEYPLMLGCSVRKNIIPVLGYLEKIGIPRSKLGEFIKMYPQVLHASVIVELAPVVRFLRGLDVEKQDIGYVLQKYPELLGFKLEGTMSTSVAYLVSIGVNPRDIGPMVTQYPYFLGMRVGTVIKPLTDYLVSLGLPKKIIARMLEKRPYILGYNLEETVKPNVDCLISFGLRKESLPLVIAQYPPILGLPLKAKLSSQQYFLSLKLKIDPEGFAQVIEKMPQVVSLNQHVIMKPVEFLLARAIPSHDVANMVIRCPQLIASRVELMKNSFYFFKSEMGRPIKELVEFPEYFTYSLESRIKPRYQKLKSKGIRFSLNWMLNCSDQRFEERLQGNYIETESTGPSFCMGGKLALPGNDNEMVSDEEEESDDEKLYRRTVSL 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1776g0001 515 MobiDBLite consensus disorder prediction 490 515 - -
Prci1776g0001 515 FunFam Transcription termination factor mterf4, chloroplastic 119 256 - -
Prci1776g0001 515 PANTHER CGI-12 PROTEIN-RELATED 154 467 IPR003690 GO:0003690|GO:0006355
Prci1776g0001 515 Pfam mTERF 155 463 IPR003690 GO:0003690|GO:0006355
Prci1776g0001 515 SMART mt_12 313 345 IPR003690 GO:0003690|GO:0006355
Prci1776g0001 515 SMART mt_12 350 380 IPR003690 GO:0003690|GO:0006355
Prci1776g0001 515 SMART mt_12 133 164 IPR003690 GO:0003690|GO:0006355
Prci1776g0001 515 SMART mt_12 205 236 IPR003690 GO:0003690|GO:0006355
Prci1776g0001 515 SMART mt_12 417 448 IPR003690 GO:0003690|GO:0006355
Prci1776g0001 515 SMART mt_12 385 416 IPR003690 GO:0003690|GO:0006355
Prci1776g0001 515 SMART mt_12 277 308 IPR003690 GO:0003690|GO:0006355
Prci1776g0001 515 SMART mt_12 241 272 IPR003690 GO:0003690|GO:0006355
Prci1776g0001 515 SMART mt_12 107 132 IPR003690 GO:0003690|GO:0006355
Prci1776g0001 515 SMART mt_12 169 200 IPR003690 GO:0003690|GO:0006355
Prci1776g0001 515 FunFam Transcription termination factor MTERF4, chloroplastic 257 471 - -
Prci1776g0001 515 Gene3D Transcription termination factor 3, mitochondrial 261 473 IPR038538 -
Prci1776g0001 515 Gene3D Transcription termination factor 3, mitochondrial 119 260 IPR038538 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Prci1776g0001 mTERF 7e-106 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1776g0001 K15031 - qsa:O6P43_029347 831.632