Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1765g0001 ATGGAGGATTTCGAGAGCAGATCATCACTAAAACCGACCCATGTATATATCAGCTATCGAGGCGGCGACGATACACGTAGATTCATCAAAAGCCTTTCTGGTGCTCTTGAAGCACAAGGTTTCAGAATCGTGGGAGATGACAAGAGTCGTGAAATCCCAGATATGGCTTTTCCGGACGAGCTTCTCCGAGCAATGAGAGAATCCTGGATTTTGATCTTGGTCCTCTCCAAAAGCTATGTTTCTTCATCTTGGTGTTTAGAGGAGCTGTCGCAGGTTGTTGGGCGACTCTTTCTTAAGGAAAAGCCAAAATGGTCATTTAAGAGAGGATATGGATTCATACCTAACCGAGCAGAAAGGAACGAGGAAGACCTGGACGAGCTGATAAAAAGATGGTGGCAACATATGAAACAACCGGCCGATCTCTGTGGACGCAGCAATAATGCAGATAGGATAATTCCAGTTTTTTACGATGTAGATTCAAAATCCTTTGCTCAACACATGCAAGAGAGCTTCCCGGGAAATTTATTCGAGGAAGCTATGCAAAAAGTGACCAATCTTTCCGGCTGGGATCTACAGTATGAATCAAGATCACAAGTTATTCCGAAGATTGTCAAAGAAGTCAAGTCAAAAATAGATAAACTATTTTATGGCTTTTTCAGATATGTTGGGATGAAATCTCGAGTGGAAGAAGTAGAACAGATTTTGGATTTGAGCTCAGACGATGAAGTTCAAGGTATAGGCATTTGTGGTATGGGCGGATCAGGGAAGTCATCCATTGCTTTAGTTCTATATCTTAAGATCCTTCACTTTTTTGATTCTTTTTGTTTCCTTCCTAATGTGAGTAGACGTTTGAAGCATGGTGACTTATCTTTGCAAGAACTCATTCATAGAAACTTGGAGACAGCAGATTTTTGTCTTATGTATCCTCAAGGCGAAGAGTTCTTGAAAAGATTAAGAAAACACAAGGTTCTCATAGTTCTTGATGGTGTAGATCATGTGCAAGATATTGAGGAATTGAACTTGATTGCAAAATCTATTTGTTTTGGCAGAGGGAGTAGAATCATAATAACAACAAGAGATGTACAAGTCCTTGAAATGTCTGGAGTTGAGAAAATTTATAGACCTAAATTGTTGTCTAAGAAGGAAGGTTCTATAATATTCCGTTCTATAGCTTTTCCAAAGGATTATCCTGTTAATGATTTTCAAGAGATGATAGACAAGGTATTGAAATATGCTAATGGGCTTCCACTAGCAATTGAAATATTGGGTTCATTCTTTTTTGGAAAAAGCGTGGCAGAATGGAGAAGTTTCTTGGATAGAGAAGAAATTATTCCTCCCCATGAGATCATAATAGTCCTTAGAAAAAGTTTTGATGAACTTGATCATAGGAGTAAGGAAATCTTTTTGGACATAGCATGTTTTTTTGCAGGAAAGAATGTTAATTGTGTGAAGGAAATTTTACATGATTCTGGTTTCCCTGCCGATATAGGAATCAAACTTCTTATTCAAAAATCACTTATTACAATTGCAAATCAAGGAATACAAATGCATGGAATGTCACAAGCAATGGGGCGAGAAATTGTTAGACAAGAATGTCCAAATCAGCCAGAAAAACGCCGTCGGTTGTACCTTTTCAATGATATCAAATATGTTATGGAGAAAGAAAGAAACATGGTGATAAAAAATGTTGAAGCTATAGTCTTGGATTTGGAAGAGCCAAAAGGGGTTACATTGAGGATCGAAGCTTTATCACAGATGATCAACCTCAGATTGCTCATATTTCGTAATGTGCATTTTTCTGGAACCCTCGATAATCTTTCGAGCAAGTTACAACATGTTTCATGGCATCAATATCCATTCACTTCTTTGCCATCGAGTTTTCAGTCTGATACACTTGTTCAATTGATTATGCCTGATAGCAACGTCACAGAAGTGTGGAAGGGCAAAATGATGCTCCTTAAGTTAAGAAAAATGAATCTTTGTGGCTCCAAAACTTTGATCAAGACGCCAGATTTTGGAGGAGTTCCAAATCTTGAGAGACTTGACCTTGAAGGTTGTACTGGATTATTGGAATTGGATCCATCTATTGCCGAACTTTCAAAGCTCAAGTTCTTGAATTTGAGAAATTGCATCAATCTTATTAGTATTCCCAATCGCTTATTTGCTCTATACTCATTGGAAATTCTAAATCTAGCTGGCTGTTCAGAATTTGCACATTGCTTGAATTTTTCTCCTTTGAAGAGCTTGACAGAAGTGAAACTGCTTAGCATTTGGTCTAATCCATTCTTAGAGAGCATTCTGTATTTTCTTTTGTATGTTTTAACAAAAAAATTGTGGTGA 2340 0.3769 MEDFESRSSLKPTHVYISYRGGDDTRRFIKSLSGALEAQGFRIVGDDKSREIPDMAFPDELLRAMRESWILILVLSKSYVSSSWCLEELSQVVGRLFLKEKPKWSFKRGYGFIPNRAERNEEDLDELIKRWWQHMKQPADLCGRSNNADRIIPVFYDVDSKSFAQHMQESFPGNLFEEAMQKVTNLSGWDLQYESRSQVIPKIVKEVKSKIDKLFYGFFRYVGMKSRVEEVEQILDLSSDDEVQGIGICGMGGSGKSSIALVLYLKILHFFDSFCFLPNVSRRLKHGDLSLQELIHRNLETADFCLMYPQGEEFLKRLRKHKVLIVLDGVDHVQDIEELNLIAKSICFGRGSRIIITTRDVQVLEMSGVEKIYRPKLLSKKEGSIIFRSIAFPKDYPVNDFQEMIDKVLKYANGLPLAIEILGSFFFGKSVAEWRSFLDREEIIPPHEIIIVLRKSFDELDHRSKEIFLDIACFFAGKNVNCVKEILHDSGFPADIGIKLLIQKSLITIANQGIQMHGMSQAMGREIVRQECPNQPEKRRRLYLFNDIKYVMEKERNMVIKNVEAIVLDLEEPKGVTLRIEALSQMINLRLLIFRNVHFSGTLDNLSSKLQHVSWHQYPFTSLPSSFQSDTLVQLIMPDSNVTEVWKGKMMLLKLRKMNLCGSKTLIKTPDFGGVPNLERLDLEGCTGLLELDPSIAELSKLKFLNLRNCINLISIPNRLFALYSLEILNLAGCSEFAHCLNFSPLKSLTEVKLLSIWSNPFLESILYFLLYVLTKKLW 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1765g0001 779 SUPERFAMILY "Winged helix" DNA-binding domain 448 551 IPR036390 -
Prci1765g0001 779 Gene3D - 214 372 IPR027417 -
Prci1765g0001 779 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 739 IPR044974 GO:0006952
Prci1765g0001 779 Pfam NB-ARC domain 227 437 IPR002182 GO:0043531
Prci1765g0001 779 Pfam TIR domain 15 136 IPR000157 GO:0007165
Prci1765g0001 779 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 218 471 IPR027417 -
Prci1765g0001 779 PRINTS Disease resistance protein signature 245 260 - -
Prci1765g0001 779 PRINTS Disease resistance protein signature 317 331 - -
Prci1765g0001 779 PRINTS Disease resistance protein signature 412 426 - -
Prci1765g0001 779 PRINTS Disease resistance protein signature 697 713 - -
Prci1765g0001 779 Gene3D - 377 461 IPR042197 -
Prci1765g0001 779 ProSiteProfiles TIR domain profile. 11 211 IPR000157 GO:0007165
Prci1765g0001 779 SUPERFAMILY L domain-like 565 764 - -
Prci1765g0001 779 Gene3D Ribonuclease Inhibitor 550 773 IPR032675 -
Prci1765g0001 779 Gene3D - 8 213 IPR035897 -
Prci1765g0001 779 SMART till_3 12 141 IPR000157 GO:0007165
Prci1765g0001 779 SUPERFAMILY Toll/Interleukin receptor TIR domain 11 143 IPR035897 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1765g0001 149 745 WRKY Transcription Factor Family AT4G12020 31.754 3.83e-68 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1765g0001 - - pcin:129300842 1533.08