Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1760g0001 ATGGGGGCTCGGTATGACGTGTTTTTGAGCTTTAGAGGCGAAGACACTAGAGCGACTTTCACCTCACATCTCTACTCTCTATCGAGCGCTGGAATTCATGTTTTCAAAGATGATGCGGTCCTTCCCAGAGGGAATCCTCTCTCAAGTGAATTGTCACGAGGAATTGAACTTTCCACAATTTCAATCATTATCTTCTCCAAAGAATATGCTGGTTCTAGATGGTGCCTTAACGAGCTCTCACAAATCATGGAGCTTCACAGGGCACAGGGTCGAGTTGTTCTGCCTGTGTTCTATGGGGTGGGTCCATCCGAAGTTCGTAATCAAATATCTGGTTTTGAAGAAGCATTTCGAGATTTAATACAACGAAGTTCACTCACAGAAGAAGAAGTGTTGAGGTGGAGAACAGCTCTCCGTGAAGTCGCGAGCATTGCAGGGTTTGTTGTGCTCAATTCCAGGAATGAAAGTGAAGATATCAAGAATATCGTTGAGCATGTCAATAAAATATTGGACAAGAAAGAGTTGTTTATTGCTGACCATCCTGTTGGAGTGTCTTCTCGTCTACAAGGTTATATTAAAATATCAAAAAACCATTCACCAAATGATGTTCTCTTGCTAGGGATATGGGGGATGGGCGGTATAGGTAAAACAACCATTGCCAAAGCCATTTATAATGAAATTGGTCGAACATTTGAGAGCAGAAGTTTTCTTTCAAATATTAGGGAAGTTTGGAAGAGAGATAATGGTCCAGTTAACTTACAGCAACAGCTTCTTTTGGAGATTTGTAAAACAGAAAAGAAGGAAATATTTAGCATCGATTTTGGAAAAGTCAAATTAAAGGAACATCTTTGCCATAAGAGAGCACTTGTTGTGCTTGATGATGTAAATAAGGTTGAGCAGCTGAATGCTTTATGTGGAAGTTGTGAATGGTTTGGTCCAGGGAGTAGAATAATTGTCACAACTAGAGATAAGCATTTGCTCAATGTTCTTAAAGTGAACCATGTATATGAAATGAAAAAGATGGACCAACATGAATCTATTGAGCTTTTCAGTTGGCATGCTTTTAAGCAACCAAGTCCTAGAAAGGGATTCGTTGAACTTTCTAGAAATATAGTTGCTTATTCTGGAGGACTGCCACTAGCACTTCAAATCCTTGGTTCCTATTTATGTGATAGGGAAGTGACAGAGTGGAAAAGTGTACTAGAGAAACTAAAAAAAATCCCCAATGATGAGATACAAAAGAAGCTAAAAATAAGTTTTGATGGGTTAAGTGATGACATGGTGAAAGAAATCTTCCTTGATATATCTTGCTTCTTTATTGGAATGGATAGGAGTGATGTCACAAAGATATTGGAAAGTAGTGGACTTTTTCCAGACATTGGAATAAGTGTCCTTGTGGAGCGGAGCCTTGTAACTATTGATGAGAAGAACAAGCTTGGCATGCATGATTTGCTGCGAGATATGGGGAGAGAAATAATCAGAGAACGATCACCAAAAGAGCTTGGAAAGTGTAGTAGGTTATGGTTTCATGAAGATGTGGTTGATTTACTATCAAAACATAGTGGTACAAAATTTGTTGAGGGGGTAGCTTTGAATCTGTTGCAAACCAATAAAGATTGTTTTTCTACCAAAGCATTTAAAAAGATGAAGACACTCAGATTGCTCTGCCTTGGTAATGTGGAGCTTGATGGAGACTATAAATACATTAGTAGAGATCTCAGATGGCTTTGTTGGTATGGGTTTCCTTTGAGAAACATCCCTGCCAACTTATATCAGAAAAAATTAGTTGCTATTGAGTTAAAATACAGTAGCCTCAAACAAGTTTGGAGGGAACCCCAGTTATTGGAGAGACTGAAAATCCTAAATTTTAGTCACTCCCCTTTCTTGACGCAGACTCCTGACTTCTCAAAACTACCAAATCTTGAAAAGTTGATTCTTAAAAATTGTCCAAATTTGTCCATTGTTCATCCTACCATTGGACATGCCAATAAACTGCTTCTAATAAACTTGAAGGATTGTACTAACCTCTGCACTCTCCCAAGAAGTGTCTATAATTTAAAATCCCTAAAAACTCTCATTCTGTCTGGTTGTGCAAAGATTGAAAAGTTAGAAGAAGACATAGAGCAAATGGATTCCTTGTCTTCTCTGATTGCTGATGACACTGCAATAACACAAGTGCCTCTTTCTTTGGCTAGGTTAAAAAGCATTGGCTATATATCTCTTTGTGGCTATAGGGGATTGTCACGTGATGTGCTTCCTACTCTCATTTGGTCAAGGATGTCCCCAACAAATAATCCTTTATCTCTAATTCCAACACATGTGGGCATGCCAATTTCCTTGAATATGTTGAATAGCAGTATGGCTGGTCTTTCATTTATTTCTAATAACTTCGCAAAACTACAAAGCCTTTTGTTGGAAATCAGATCACAGAATGACCCTGAAATGATTCGCAGTGCTGCCAAAATTTTGGAGTCCGTTTATGCCAGAATTTGCATGGATATGGCAACAATACCAAATGCTTCAAAAATCAAAGAGACTGAATCTTCTGTGTTATCTAGCCGTGATAGTCAGGTTCACATCTCAAGATCAGAAAATTGTTTGAGACATCTTCTAATTCAAATAGCAAAGAATGATCAAGTCACTGCCACTCTTCTAGAGAATATTTTACAGGGGTTGAGTCCCAGTAAGTACGGTGATGATTGTGTCCTCCCAGGTGACAAATATCCCTATTGGCAAAGTTTCAAGAGTGAAAGAGCTTCTGTGAAATTTGAAGTGCCTCGAGTTAGTGGTTGTGACTTGAAAGGGATGGTCATTTGTTGTGTATATTTCCCTTCAGGTGATCTGGGAAACATGGCTTTTGAATCTTATATTAGCTTAATGATCATAAATTATACAAAGACAACCACTCTTCACTACAGGCAAGATTCACTAACTTCATTTGAAGAAGCAGAGTGGAAGGAAATAGTAGCAAATCTAGATTCAAATGACCAAGTGGAGGTGATTGTAGTTTTTGGTAATGGATTCACTGTGAAAAGGACAGCAATCTACTTGAAATATCATGAGTCATTTGACGAGCAGATGGAACATCCACTATCACTAAGCAGAGAAATGCATATAGAAGACAAAGACCATGATTTTGAGCTCTCGGGTAGAAAAAGAAAAAGAGAAGAGTTGTTGGAGCCTAAGCTTCAGAGGGGAGAAAGTGGTGGAATCCCATGA 3216 0.3856 MGARYDVFLSFRGEDTRATFTSHLYSLSSAGIHVFKDDAVLPRGNPLSSELSRGIELSTISIIIFSKEYAGSRWCLNELSQIMELHRAQGRVVLPVFYGVGPSEVRNQISGFEEAFRDLIQRSSLTEEEVLRWRTALREVASIAGFVVLNSRNESEDIKNIVEHVNKILDKKELFIADHPVGVSSRLQGYIKISKNHSPNDVLLLGIWGMGGIGKTTIAKAIYNEIGRTFESRSFLSNIREVWKRDNGPVNLQQQLLLEICKTEKKEIFSIDFGKVKLKEHLCHKRALVVLDDVNKVEQLNALCGSCEWFGPGSRIIVTTRDKHLLNVLKVNHVYEMKKMDQHESIELFSWHAFKQPSPRKGFVELSRNIVAYSGGLPLALQILGSYLCDREVTEWKSVLEKLKKIPNDEIQKKLKISFDGLSDDMVKEIFLDISCFFIGMDRSDVTKILESSGLFPDIGISVLVERSLVTIDEKNKLGMHDLLRDMGREIIRERSPKELGKCSRLWFHEDVVDLLSKHSGTKFVEGVALNLLQTNKDCFSTKAFKKMKTLRLLCLGNVELDGDYKYISRDLRWLCWYGFPLRNIPANLYQKKLVAIELKYSSLKQVWREPQLLERLKILNFSHSPFLTQTPDFSKLPNLEKLILKNCPNLSIVHPTIGHANKLLLINLKDCTNLCTLPRSVYNLKSLKTLILSGCAKIEKLEEDIEQMDSLSSLIADDTAITQVPLSLARLKSIGYISLCGYRGLSRDVLPTLIWSRMSPTNNPLSLIPTHVGMPISLNMLNSSMAGLSFISNNFAKLQSLLLEIRSQNDPEMIRSAAKILESVYARICMDMATIPNASKIKETESSVLSSRDSQVHISRSENCLRHLLIQIAKNDQVTATLLENILQGLSPSKYGDDCVLPGDKYPYWQSFKSERASVKFEVPRVSGCDLKGMVICCVYFPSGDLGNMAFESYISLMIINYTKTTTLHYRQDSLTSFEEAEWKEIVANLDSNDQVEVIVVFGNGFTVKRTAIYLKYHESFDEQMEHPLSLSREMHIEDKDHDFELSGRKRKREELLEPKLQRGESGGIP 1071
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1760g0001 1071 MobiDBLite consensus disorder prediction 1043 1062 - -
Prci1760g0001 1071 Pfam NB-ARC domain 201 412 IPR002182 GO:0043531
Prci1760g0001 1071 Gene3D - 2 166 IPR035897 -
Prci1760g0001 1071 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 5 746 IPR044974 GO:0006952
Prci1760g0001 1071 Gene3D - 339 423 IPR042197 -
Prci1760g0001 1071 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 168 434 IPR027417 -
Prci1760g0001 1071 Gene3D - 167 335 IPR027417 -
Prci1760g0001 1071 Gene3D Ribonuclease Inhibitor 515 821 IPR032675 -
Prci1760g0001 1071 MobiDBLite consensus disorder prediction 1043 1071 - -
Prci1760g0001 1071 ProSiteProfiles TIR domain profile. 3 169 IPR000157 GO:0007165
Prci1760g0001 1071 SUPERFAMILY "Winged helix" DNA-binding domain 409 516 IPR036390 -
Prci1760g0001 1071 FunFam Disease resistance protein (TIR-NBS-LRR class) 2 171 - -
Prci1760g0001 1071 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 146 IPR035897 -
Prci1760g0001 1071 PRINTS Disease resistance protein signature 204 219 - -
Prci1760g0001 1071 PRINTS Disease resistance protein signature 281 295 - -
Prci1760g0001 1071 PRINTS Disease resistance protein signature 683 699 - -
Prci1760g0001 1071 PRINTS Disease resistance protein signature 374 388 - -
Prci1760g0001 1071 Pfam TIR domain 5 168 IPR000157 GO:0007165
Prci1760g0001 1071 SMART till_3 4 143 IPR000157 GO:0007165
Prci1760g0001 1071 SUPERFAMILY L domain-like 493 846 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1760g0001 5 756 WRKY Transcription Factor Family AT4G12020 30.888 9.55e-81 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1760g0001 - - pcin:129288835 1852.41