Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1758g0002 ATGGAGCACAAGCATGTTTTGCTGTCAGCACTGAGTGTTGGGGTTGGTCTTGGAGCTGGCCTTAGGTTGAGTTCAGGGCTTGGAGGGGATCACGAGTCTGGTGATGAGCTTTATGGTGAGCAGATTGAGCAGGAGCTTATGAGGCAGGTGATTGATGGCAAGGAATGTGAGGAAACATTTCAACAGTTTCCTTATTACTTGAGTGAAAGAACTCGAGAGTTATTGATTAGTGCTGCATCTGTTCATTTAAGACAACTTTATTTTTCCAAACACACCCGGAACCTTTCCCCGGCAAGCAGGGCAATTCTGCTTTCTGGACCTGCAGAACTTTACCTGCAAACTCTTGCCAAGGCTTTAGCACATCGCTTTGAATCAAAGTTGCTGCTACTAGATGTTGCTGACTTCTCTCTCAAGATACAGAGCAAATATGGATGTTCAAGAAAAGAATCGTCTCCTAAAAGGTCCTTATCTGAGGTGGCTTCAGAGAGATTGTCTGGTTTGCTTGGTTCCTTAACAGTTCTCCCTTCAAATGGCAAAACTAAAGGCACTTTTCACAAAGGCAGTAATACTACTGGAAGTCCCAAGGTTACTTCAAAGCTTCAGGGGAATACTGCTTCCAAATCATCCCCTGCAAATTCAGCTTCCTTGAAGAACAAAAGCAGCTTGTGTGTCGATGAAAAACTCTTTATGCAGCTGCTTTTTAAGGTCTTGGCTTCTGTGTCAGAAAAGAGTTCCATCATTTTGTACATCAGGGATGCTGACAAAATTTTCCTTCAATCAGAGCAATTGTATAATTTATTTAAAGAAATGCTAGAGGAACTTTCAGGGCCAGTCCTGATACTTGGTTCCAAGATTGCAGAGAAAACCAAAAAACCTGATCTCCCACCATGGCTAGCTCCGCCTCGCAAAGTGGATAAATGTTCAAAAGTTGATGAAAGGCTTGCAGCGTTATTTCCATACATCATTCCGATCAAACCACCAGAAGATGAGAGTGATCTTGAAGATTGGAAAACCCAACTGGAAGAGAACAAGAAAATAATTAAGTCTCAAGATAACAGAAACCACATTGCTGAAGTACTGGCAGCAAATGATGTTGAATGTAAAGACTTGAATTCAATCAGCCATGAGGACACAAAGACATTAAGCAGATATATTGATGAAATTGTGATATCTGCAATATCTTACTACTTGATGAATACGAAGGATCCAGAATATCGGAATGGGAGGCTTGTAATATCATCTGAGAGTTTGTGCCATGGTTTGGATCTATTTCGCAAACAGAAAAGTAGTGCCAGTGGAAAGAAGGAAGAGACTGGTGGAAAGAAGGACGTTCGTCCAGACAATGAAAATGAGAGGAACATAAGATCAGAACTAGTCCCCGCAAATGAGATAGGAGTTACATTCTCGGATATTGGTGCATTAGAGGAGGTTAAGGAATCACTCCAAGAGCTAGTCATGCTTCCTCTTCGAAGACCAGACCTCTTCAAAAGTGGACTTCTTAAGCCTTGCCGAGGTATATTGTTGTTTGGGCCACCAGGTACTGGAAAAACAATGCTTGCAAAGGCAATTGCAAAGGAAGCGGGAGCAAGTTTCATAAATGTCTCAATGTCTACCATCATGTCAATGTGGTATGGAGAAGCTGAAAAGAATATCCGAGCTCTGTTCTCACTAGCTGCAAAGGTTTCTCCAACTATTATTTTTATTGATGAGGTTGATAGCCTGCTTGGGCGACGGTCAAGATGTGGAGAGCATGAGGCTACAAGGAGGGTTAAGAATGAATTCATGACCCATTGGGATGGTCTATTGACAAAACAAGGGGAGCGAATTCTAGTTCTTGCTGCAACCAACAGGCCATTTGACCTTGATGATGCAATCATAAGACGGTTTGAGCGAAGAATCATGGTTGGTCTTCCATCAGTTGAGGCTAGGGAAATTATCTTGAAAACTCTCCTAGCTAAGGAAAATACTGAAAATTTAGACTTCAAACAGCTTGCACTCCTGACAGAGGGATATACTGGAAGTGATCTCAAGAATGTGTGCATTGCTGCTGCTTATCGACCTGTGAGGGAGCTTATTAAACAGGAGAGATTGAAGGATATGGTAATTTACTAA 2112 0.42 MEHKHVLLSALSVGVGLGAGLRLSSGLGGDHESGDELYGEQIEQELMRQVIDGKECEETFQQFPYYLSERTRELLISAASVHLRQLYFSKHTRNLSPASRAILLSGPAELYLQTLAKALAHRFESKLLLLDVADFSLKIQSKYGCSRKESSPKRSLSEVASERLSGLLGSLTVLPSNGKTKGTFHKGSNTTGSPKVTSKLQGNTASKSSPANSASLKNKSSLCVDEKLFMQLLFKVLASVSEKSSIILYIRDADKIFLQSEQLYNLFKEMLEELSGPVLILGSKIAEKTKKPDLPPWLAPPRKVDKCSKVDERLAALFPYIIPIKPPEDESDLEDWKTQLEENKKIIKSQDNRNHIAEVLAANDVECKDLNSISHEDTKTLSRYIDEIVISAISYYLMNTKDPEYRNGRLVISSESLCHGLDLFRKQKSSASGKKEETGGKKDVRPDNENERNIRSELVPANEIGVTFSDIGALEEVKESLQELVMLPLRRPDLFKSGLLKPCRGILLFGPPGTGKTMLAKAIAKEAGASFINVSMSTIMSMWYGEAEKNIRALFSLAAKVSPTIIFIDEVDSLLGRRSRCGEHEATRRVKNEFMTHWDGLLTKQGERILVLAATNRPFDLDDAIIRRFERRIMVGLPSVEAREIILKTLLAKENTENLDFKQLALLTEGYTGSDLKNVCIAAAYRPVRELIKQERLKDMVIY 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1758g0002 703 Gene3D - 638 694 - -
Prci1758g0002 703 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 465 640 - -
Prci1758g0002 703 MobiDBLite consensus disorder prediction 428 454 - -
Prci1758g0002 703 ProSitePatterns AAA-protein family signature. 609 628 IPR003960 GO:0005524|GO:0016887
Prci1758g0002 703 Pfam AAA+ lid domain 658 700 IPR041569 -
Prci1758g0002 703 MobiDBLite consensus disorder prediction 178 215 - -
Prci1758g0002 703 SMART AAA_5 502 639 IPR003593 GO:0016887
Prci1758g0002 703 Gene3D - 466 637 IPR027417 -
Prci1758g0002 703 Pfam ATPase family associated with various cellular activities (AAA) 506 636 IPR003959 GO:0005524|GO:0016887
Prci1758g0002 703 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 464 686 IPR027417 -
Prci1758g0002 703 Coils Coil 333 353 - -
Prci1758g0002 703 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 41 696 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1758g0002 466 697 Calmodulin-binding Proteins AT3G56690 39.831 4.41e-43 166