Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1758g0001 ATGGAGCACAAGCATGTTTTGCTGTCAGCACTGAGTGTTGGGGTTGGTCTTGGAGCTGGCCTTAGGTTGAGTTCAGGGCTTGGAGGGGATCACGAGTCTGGTGATGAGCTTTATGGTGAGCAGATTGAGCAGGAGCTTATGAGGCAGGTGATTGATGGCAAGGAATGTGAGGAAACATTTCAACAGTTTCCTTATTACTTGAGTGAAAGAACTCGAGAGTTATTGATTAGTGCTGCATCTGTTCATTTAAGACAACTTTATTTTTCCAAACACACCCGGAACCTTTCCCCGGCAAGCAGGGCAATTCTGCTTTCTGGACCTGCAGAACTTTACCTGCAAACTCTTGCCAAGGCTTTAGCACATCGCTTTGAATCAAAGTTGCTGCTACTAGATGTTGCTGACTTCTCTCTCAAGATACAGAGCAAATATGGATGTTCAAGAAAAGAATCGTCTCCTAAAAGGTCCTTATCTGAGGTGGCTTCAGAGAGATTGTCTGGTTTGCTTGGTTCCTTAACAGTTCTCCCTTCAAATGGCAAAACTAAAGGCACTTTTCACAAAGGCAGTAATACTACTGGAAGTCCCAAGGTTACTTCAAAGCTTCAGGGGAATACTGCTTCCAAATCATCCCCTGCAAATTCAGCTTCCTTGAAGAACAAAAGCAGCTTGTGTGTCGATGAAAAACTCTTTATGCAGCTGCTTTTTAAGGTCTTGGCTTCTGTGTCAGAAAAGAGTTCCATCATTTTGTACATCAGGGATGCTGACAAAATTTTCCTTCAATCAGAGCAATTGTATAATTTATTTAAAGAAATGCTAGAGGAACTTTCAGGGCCAGTCCTGATACTTGGTTCCAAGATTGCAGAGAAAACCAAAAAACCTGCAGATCTCCCACCATGGCTAGCTCCGCCTCGCAAAGTGGATAAATGTTCAAAAGTTGATGAAAGGCTTGCAGCGTTATTTCCATACATCATTCCGATCAAACCACCAGAAGATGAGAGTGATCTTGAAGATTGGAAAACCCAACTGGAAGAGAACAAGAAAATAATTAAGTCTCAAGATAACAGAAACCACATTGCTGAAGTACTGGCAGCAAATGATGTTGAATGTAAAGACTTGAATTCAATCAGCCATGAGGACACAAAGACATTAAGCAGATATATTGATGAAATTGTGATATCTGCAATATCTTACTACTTGATGAATACGAAGGATCCAGAATATCGGAATGGGAGGCTTGTAATATCATCTGAGAGTTTGTGCCATGGTTTGGATCTATTTCGCAAACAGAAAAGTAGTGCCAGTGGAAAGAAGGAAGAGACTGGTGGAAAGAAGGACGTTCGTCCAGACAATGAAAATGAGAGGAACATAAGATCAGAACTAGTCCCCGCAAATGAGATAGGAGTTACATTCTCGGATATTGGTGCATTAGAGGAGGTTAAGGAATCACTCCAAGAGCTAGTCATGCTTCCTCTTCGAAGACCAGACCTCTTCAAAAGTGGACTTCTTAAGCCTTGCCGAGGTATATTGTTGTTTGGGCCACCAGGTACTGGAAAAACAATGCTTGCAAAGGCAATTGCAAAGGAAGCGGGAGCAAGTTTCATAAATGTCTCAATGTCTACCATCATGTCAATGTGGTATGGAGAAGCTGAAAAGAATATCCGAGCTCTGTTCTCACTAGCTGCAAAGGTTTCTCCAACTATTATTTTTATTGATGAGGTTGATAGCCTGCTTGGGCGACGGTCAAGATGTGGAGAGCATGAGGCTACAAGGAGGGTTAAGAATGAATTCATGACCCATTGGGATGGTCTATTGACAAAACAAGGGGAGCGAATTCTAGTTCTTGCTGCAACCAACAGGCCATTTGACCTTGATGATGCAATCATAAGACGGTTTGAGCGAAGAATCATGGTTGGTCTTCCATCAGTTGAGGCTAGGGAAATTATCTTGAAAACTCTCCTAGCTAAGGAAAATACTGAAAATTTAGACTTCAAACAGCTTGCACTCCTGACAGAGGGATATACTGGAAGTGATCTCAAGAATGTGTGCATTGCTGCTGCTTATCGACCTGTGAGGGAGCTTATTAAACAGGAGAGATTGAAGGATATGGTAATTTACTAA 2115 0.4203 MEHKHVLLSALSVGVGLGAGLRLSSGLGGDHESGDELYGEQIEQELMRQVIDGKECEETFQQFPYYLSERTRELLISAASVHLRQLYFSKHTRNLSPASRAILLSGPAELYLQTLAKALAHRFESKLLLLDVADFSLKIQSKYGCSRKESSPKRSLSEVASERLSGLLGSLTVLPSNGKTKGTFHKGSNTTGSPKVTSKLQGNTASKSSPANSASLKNKSSLCVDEKLFMQLLFKVLASVSEKSSIILYIRDADKIFLQSEQLYNLFKEMLEELSGPVLILGSKIAEKTKKPADLPPWLAPPRKVDKCSKVDERLAALFPYIIPIKPPEDESDLEDWKTQLEENKKIIKSQDNRNHIAEVLAANDVECKDLNSISHEDTKTLSRYIDEIVISAISYYLMNTKDPEYRNGRLVISSESLCHGLDLFRKQKSSASGKKEETGGKKDVRPDNENERNIRSELVPANEIGVTFSDIGALEEVKESLQELVMLPLRRPDLFKSGLLKPCRGILLFGPPGTGKTMLAKAIAKEAGASFINVSMSTIMSMWYGEAEKNIRALFSLAAKVSPTIIFIDEVDSLLGRRSRCGEHEATRRVKNEFMTHWDGLLTKQGERILVLAATNRPFDLDDAIIRRFERRIMVGLPSVEAREIILKTLLAKENTENLDFKQLALLTEGYTGSDLKNVCIAAAYRPVRELIKQERLKDMVIY 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1758g0001 704 Coils Coil 334 354 - -
Prci1758g0001 704 ProSitePatterns AAA-protein family signature. 610 629 IPR003960 GO:0005524|GO:0016887
Prci1758g0001 704 Gene3D - 639 695 - -
Prci1758g0001 704 SMART AAA_5 503 640 IPR003593 GO:0016887
Prci1758g0001 704 MobiDBLite consensus disorder prediction 429 455 - -
Prci1758g0001 704 MobiDBLite consensus disorder prediction 178 215 - -
Prci1758g0001 704 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 466 641 - -
Prci1758g0001 704 Pfam AAA+ lid domain 659 701 IPR041569 -
Prci1758g0001 704 Gene3D - 467 638 IPR027417 -
Prci1758g0001 704 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 465 687 IPR027417 -
Prci1758g0001 704 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 41 697 - -
Prci1758g0001 704 Pfam ATPase family associated with various cellular activities (AAA) 507 637 IPR003959 GO:0005524|GO:0016887
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1758g0001 467 698 Calmodulin-binding Proteins AT3G56690 39.831 4.00e-43 166