Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1752g0004 ATGGCTCCTCGTGCCGACGAAAACGACGAAGATGACCTCTCCTCCGGCGAAGACGATGACGGTTTCAAGGAGGACATGGAAGCCCTCGCACGAGCCTGCATGATCGCCGGCACTAACCCCGATGGTATTAAACCATCTTCTACTGTCGCTCCCGACGATGATTATAATGCAGACGCGGTGGTTCCCAAAGCATCGGACCCGCTGTTGGGCCCCGGCGATGCTCTCGTCCCCGTGTCAGACTCTGACGACGAGCAGAGGGACCTTCAGTATCTCAAAAGAGTGCAGGAGCTTTACCAGCCTTCGTCATTCAAGCCATTGAAAATTCTTCCGGCGCTTTCTTTGTCTGATGATGATGAAGATGACATGGAAACCCTCCGTGCCATTATGAGACGCTTTTCTGCTTATGAAAGAGCAGGCCCTGATGAAGATAATGTGGATAAAATGGCTGAGGGAGCTCATACCTCAGGTCTAGGCTCTGAGGAGGAATTTGATAACAGCGTGGCATCTAAGGGATTAGATCCCGGTGAATCATGCCCTGTTTCTCAGGATGCTATTAAGACCACCAGTTTATTAACTACTGCTGAAGTTGAGAGACATCCTTGTAACATCAATGAAAGGTGTGAACCCAAGGCTTGCAAGCCATCCAAGTTACTGGACAAAAGATCAAGATTTCCTTTGTCTGCTCAGGTTTTTATTGATGCAATCAAGAAGAATAGATCTTTCCAGAAGTTACTGCGAAGTAAGTTGATTCAGATGGAAGCAAAAATTCAAGAAAACAAACAGTTAAGGGAAAGAGTTAAACTTCTTAAAGATTTTCAGGTTTCATGCATAAGAAGAACAGGGCAAGCTATATCACTGAAAAAGGATCCCCGCATACTGTTAATATCAGCAAAAAAGTCTACTGCTTCAAGTACCACAAAGATTAATGATAAAAAAATATCTCCAATGTGTTATGGCCCAGCTGAGAATGCTCATGTTGCTAAATATAGGATGGTGTTGGAACGATCTCCATTCTCATTGGATCGGAAAAAGTGGTCTAGTGTGGAGAGGGAGAATCTTGCTAAGGGAATAAAGCAACAATTTCAAGAAATTTTGCTTCAAATGTCAATAAATCAAGACAGTTCAGAGTGGTCGTGTGGATATGCAAATAACTTTGATAACATGCTTGTATCTATTAAAGATCTTGAGATTACGCCAGAGAACATCAGAAAGTTTCTGCCTGAATTCAATTGGGATCAGTTGGCTTCCAAGTATGTTACTGGTCGTACTGGTGCAGAATGTGAAGCAAGGTGGTTAAATTGTGAAGATCCATTGATCAATCATAGTCCATGGACATGTGAGGAGGACAAGTTGCTTTTGCATATAATCCAAGAGATTGGCAATAGGGACTGGTTTAAAATTGCTGCATTGCTGAACACAAATAGGACCCCATTTCAGTGCTTGGCACGATACCAAAGGAGTTTAAATCCTGCCATGCTAAATAGTGAATGGACTGAGGAAGAAGATGCTCAACTTTGTTATGCTGTCTCAATTTTTGGTGTCAGCAATTGGCAGTCTGTTGCTTCTGTTTTAGAACGAAGGACGGGAACTCAATGCTCTAATAGATGGAAGAAGTCACTCTGTCCTGATAGGAAAGGGAGCTTTACTGCAGAAGAAGATGAGCGCTTAACAGTGGCCGTCCATCTCTTTGGACGGAAATGGAATCAGATAGCTAAATTTGTTCCTGGCCGGACCCAAGCTCAGTGCAGAGACAGATACGTCAATAGTTTGGATCCCTCCTTGAAATGGGGTGGATGGACTAAGGAAGAAGATTCAAGGTTGAAAAAAGCAATTGCCAAACATGGATTCTTCTGGTCAAAGGTTGCTGCAGATGTGCCTCCACGAACTGACAGTCAATGCAGGAAGAGATGGCGGGTTCTATGTCCTGACCAAGTCCCTATGCTTCAAGAAGCTAGAAAGATGCAAAAATCTGCTTTAATCAGTAACTTTGTTGATCGGGAGTCTGAACGGCCGTGCCTTTCTCTAAATGATTTTCTTCCCTTGGCAATGATAGATCCACCACCTGATCCAGATGCTGTGAGCCTCCCTCAGAAGCGGAAGAGCAAGTCAAGCAATGCTTCCAAGAAGAAGAGGCCCCAAAAACGTGCAAAAAAGGCTCAAAGTTGTCTCAAGAAGGCACAGGTTGACAAGGTTGAGCCTTGTAGTGGGCATGGTGTCCACAAGCCAAAAATTATTGGATCGCATTTGGAGGACAATTCTGTTGAAGCAGTGTATGATCATTCCCCACTGGACTCGGTTGTGATGACAACAAATTACCAAGAGGATTTAGGGACTACAGATGGGCAATCTGAGAAAATCTCTTCCATGAACCCATCAAAACACCAAACTGGAAGAAACTCAATGCTCTCTGCAAATATATCTGATGGTGCAGCTGTAGGTCGCAAGGTTGCCAGAAATACTACTTCAAAGAAGGAAAGAAAGAAGACAGGGAAACGCAATGGAATGGTTAGTGTTGAAACGGCAGAGGACCACCTGGTTAAGTATAAAATGCCAAAACCTGGAAGCATATCTTCTATGCAGATTTTAGAAAGTCAGGATGAAGACAATATAACTCTTGCTAGATTTATACGCAATATATCAAACAAACAGTTTAAAAATACCGATCAAATGACTCAGGCTGCTTCCTATGCTAGTAGTTTCGTAAAAAAATCACGGAGATCTCGTCGGGCTGCCAAAAGAACTTGTGATTACATGCCTTTTAGTTTGAAGAAGGGACATGAATTGCTTTCTGAAGAAGTGCGCCACGGTCATGACAGAAACCAAGAAATGTCGTTCATGCAAGACAAGAATTTAGATGAAGGTTGTATTGATGTTACACCAGGGACTCTATTGGTCCACAATCATTCTTCCAATTTGAAGAACATGTCAATCATTGAAGCTGATGACAATGGGAAGGCAATGTCAGAGCTAGTCTGCGAGCAGACTATGTTTTTGGATGGTGCTATGGAACCCAAAAACATTGGAGAGAATGTGCCTACTGATGTTACCCTTGCTTCTTTTCTGAAAAAGAAGAAAATCAAGAAGGGCAAGGCAATATCAGAGCCAGTTGATGAGCAAGCTATAGATTTGAATTTTTTGACAGAAGCGGAAAACACGAGGGGTGGAGAGGATGGGTCTCTCAACGTTACTCTTGCTTCCTTGCTGAAAAAGAAAGGAAGGAGAGAGGGTAGAACAACCAAACGGAGCATTCGTCCCTCATAA 3261 0.4318 MAPRADENDEDDLSSGEDDDGFKEDMEALARACMIAGTNPDGIKPSSTVAPDDDYNADAVVPKASDPLLGPGDALVPVSDSDDEQRDLQYLKRVQELYQPSSFKPLKILPALSLSDDDEDDMETLRAIMRRFSAYERAGPDEDNVDKMAEGAHTSGLGSEEEFDNSVASKGLDPGESCPVSQDAIKTTSLLTTAEVERHPCNINERCEPKACKPSKLLDKRSRFPLSAQVFIDAIKKNRSFQKLLRSKLIQMEAKIQENKQLRERVKLLKDFQVSCIRRTGQAISLKKDPRILLISAKKSTASSTTKINDKKISPMCYGPAENAHVAKYRMVLERSPFSLDRKKWSSVERENLAKGIKQQFQEILLQMSINQDSSEWSCGYANNFDNMLVSIKDLEITPENIRKFLPEFNWDQLASKYVTGRTGAECEARWLNCEDPLINHSPWTCEEDKLLLHIIQEIGNRDWFKIAALLNTNRTPFQCLARYQRSLNPAMLNSEWTEEEDAQLCYAVSIFGVSNWQSVASVLERRTGTQCSNRWKKSLCPDRKGSFTAEEDERLTVAVHLFGRKWNQIAKFVPGRTQAQCRDRYVNSLDPSLKWGGWTKEEDSRLKKAIAKHGFFWSKVAADVPPRTDSQCRKRWRVLCPDQVPMLQEARKMQKSALISNFVDRESERPCLSLNDFLPLAMIDPPPDPDAVSLPQKRKSKSSNASKKKRPQKRAKKAQSCLKKAQVDKVEPCSGHGVHKPKIIGSHLEDNSVEAVYDHSPLDSVVMTTNYQEDLGTTDGQSEKISSMNPSKHQTGRNSMLSANISDGAAVGRKVARNTTSKKERKKTGKRNGMVSVETAEDHLVKYKMPKPGSISSMQILESQDEDNITLARFIRNISNKQFKNTDQMTQAASYASSFVKKSRRSRRAAKRTCDYMPFSLKKGHELLSEEVRHGHDRNQEMSFMQDKNLDEGCIDVTPGTLLVHNHSSNLKNMSIIEADDNGKAMSELVCEQTMFLDGAMEPKNIGENVPTDVTLASFLKKKKIKKGKAISEPVDEQAIDLNFLTEAENTRGGEDGSLNVTLASLLKKKGRREGRTTKRSIRPS 1086
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1752g0004 1086 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 436 492 IPR017930 -
Prci1752g0004 1086 SMART sant 544 592 IPR001005 -
Prci1752g0004 1086 SMART sant 595 643 IPR001005 -
Prci1752g0004 1086 SMART sant 440 490 IPR001005 -
Prci1752g0004 1086 SMART sant 493 542 IPR001005 -
Prci1752g0004 1086 SMART sant 341 437 IPR001005 -
Prci1752g0004 1086 ProSiteProfiles Myb-like domain profile. 544 590 IPR001005 -
Prci1752g0004 1086 PANTHER SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 4 15 1040 - -
Prci1752g0004 1086 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 497 544 IPR017930 -
Prci1752g0004 1086 ProSiteProfiles Myb-like domain profile. 436 488 IPR001005 -
Prci1752g0004 1086 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 545 585 IPR017930 -
Prci1752g0004 1086 Gene3D - 442 492 - -
Prci1752g0004 1086 Gene3D - 495 543 - -
Prci1752g0004 1086 Coils Coil 245 265 - -
Prci1752g0004 1086 Gene3D - 544 596 - -
Prci1752g0004 1086 Gene3D - 338 441 - -
Prci1752g0004 1086 MobiDBLite consensus disorder prediction 687 724 - -
Prci1752g0004 1086 ProSiteProfiles Myb-like domain profile. 489 540 IPR001005 -
Prci1752g0004 1086 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 591 645 IPR017930 -
Prci1752g0004 1086 MobiDBLite consensus disorder prediction 702 721 - -
Prci1752g0004 1086 MobiDBLite consensus disorder prediction 778 799 - -
Prci1752g0004 1086 CDD SANT 599 640 IPR001005 -
Prci1752g0004 1086 MobiDBLite consensus disorder prediction 1 26 - -
Prci1752g0004 1086 SUPERFAMILY Homeodomain-like 493 586 IPR009057 -
Prci1752g0004 1086 Gene3D - 597 643 - -
Prci1752g0004 1086 ProSiteProfiles SANT domain profile. 543 588 IPR017884 -
Prci1752g0004 1086 MobiDBLite consensus disorder prediction 63 82 - -
Prci1752g0004 1086 MobiDBLite consensus disorder prediction 813 833 - -
Prci1752g0004 1086 ProSiteProfiles Myb-like domain profile. 591 641 IPR001005 -
Prci1752g0004 1086 SUPERFAMILY Homeodomain-like 416 485 IPR009057 -
Prci1752g0004 1086 CDD SANT 547 590 IPR001005 -
Prci1752g0004 1086 MobiDBLite consensus disorder prediction 152 179 - -
Prci1752g0004 1086 SUPERFAMILY Homeodomain-like 570 644 IPR009057 -
Prci1752g0004 1086 CDD SANT 496 540 IPR001005 -
Prci1752g0004 1086 Pfam Myb-like DNA-binding domain 548 607 - -
Prci1752g0004 1086 Pfam Myb-like DNA-binding domain 444 505 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1752g0004 222 722 MYB-Related Transcription Factor Family AT3G18100 53.033 0.0 544
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci1752g0004 Myb_DNA-bind_6 1.3e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1752g0004 K09422 - gmx:778073 835.869