Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1752g0003 ATGGCTCCTCGTGCCGACGAAAACGACGAAGATGACCTCTCCTCCGGCGAAGACGATGACGGTTTCAAGGAGGACATGGAAGCCCTCGCACGAGCCTGCATGATCGCCGGCACTAACCCCGATGGTATTAAACCATCTTCTACTGTCGCTCCCGACGATGATTATAATGCAGACGCGGTGGTTCCCAAAGCATCGGACCCGCTGTTGGGCCCCGGCGATGCTCTCGTCCCCGTGTCAGACTCTGACGACGAGCAGAGGGACCTTCAGTATCTCAAAAGAGTGCAGGAGCTTTACCAGCCTTCGTCATTCAAGCCATTGAAAATTCTTCCGGCGCTTTCTTTGTCTGATGATGATGAAGATGACATGGAAACCCTCCGTGCCATTATGAGACGCTTTTCTGCTTATGAAAGAGCAGGCCCTGATGAAGATAATGTGGATAAAATGGCTGAGGGAGCTCATACCTCAGGTCTAGGCTCTGAGGAGGAATTTGATAACAGCGTGGCATCTAAGGGATTAGATCCCGGTGAATCATGCCCTGTTTCTCAGGATGCTATTAAGACCACCAGTTTATTAACTACTGCTGAAGTTGAGAGACATCCTTGTAACATCAATGAAAGGTGTGAACCCAAGGCTTGCAAGCCATCCAAGTTACTGGACAAAAGATCAAGATTTCCTTTGTCTGCTCAGGTTTTTATTGATGCAATCAAGAAGAATAGATCTTTCCAGAAGTTACTGCGAAATTTTCAGGTTTCATGCATAAGAAGAACAGGGCAAGCTATATCACTGAAAAAGGATCCCCGCATACTGTTAATATCAGCAAAAAAGTCTACTGCTTCAAGTACCACAAAGATTAATGATAAAAAAATATCTCCAATGTGTTATGGCCCAGCTGAGAATGCTCATGTTGCTAAATATAGGATGGTGTTGGAACGATCTCCATTCTCATTGGATCGGAAAAAGTGGTCTAGTGTGGAGAGGGAGAATCTTGCTAAGGGAATAAAGCAACAATTTCAAGAAATTTTGCTTCAAATGTCAATAAATCAAGACAGTTCAGAGTGGTCGTGTGGATATGCAAATAACTTTGATAACATGCTTGTATCTATTAAAGATCTTGAGATTACGCCAGAGAACATCAGAAAGTTTCTGCCTGAATTCAATTGGGATCAGTTGGCTTCCAAGTATGTTACTGGTCGTACTGGTGCAGAATGTGAAGCAAGGTGGTTAAATTGTGAAGATCCATTGATCAATCATAGTCCATGGACATGTGAGGAGGACAAGTTGCTTTTGCATATAATCCAAGAGATTGGCAATAGGGACTGGTTTAAAATTGCTGCATTGCTGAACACAAATAGGACCCCATTTCAGTGCTTGGCACGATACCAAAGGAGTTTAAATCCTGCCATGCTAAATAGTGAATGGACTGAGGAAGAAGATGCTCAACTTTGTTATGCTGTCTCAATTTTTGGTGTCAGCAATTGGCAGTCTGTTGCTTCTGTTTTAGAACGAAGGACGGGAACTCAATGCTCTAATAGATGGAAGAAGTCACTCTGTCCTGATAGGAAAGGGAGCTTTACTGCAGAAGAAGATGAGCGCTTAACAGTGGCCGTCCATCTCTTTGGACGGAAATGGAATCAGATAGCTAAATTTGTTCCTGGCCGGACCCAAGCTCAGTGCAGAGACAGATACGTCAATAGTTTGGATCCCTCCTTGAAATGGGGTGGATGGACTAAGGAAGAAGATTCAAGGTTGAAAAAAGCAATTGCCAAACATGGATTCTTCTGGTCAAAGGTTGCTGCAGATGTGCCTCCACGAACTGACAGTCAATGCAGGAAGAGATGGCGGGTTCTATGTCCTGACCAAGTCCCTATGCTTCAAGAAGCTAGAAAGATGCAAAAATCTGCTTTAATCAGTAACTTTGTTGATCGGGAGTCTGAACGGCCGTGCCTTTCTCTAAATGATTTTCTTCCCTTGGCAATGATAGATCCACCACCTGATCCAGATGCTGTGAGCCTCCCTCAGAAGCGGAAGAGCAAGTCAAGCAATGCTTCCAAGAAGAAGAGGCCCCAAAAACGTGCAAAAAAGGCTCAAAGTTGTCTCAAGAAGGCACAGGTTGACAAGGTTGAGCCTTGTAGTGGGCATGGTGTCCACAAGCCAAAAATTATTGGATCGCATTTGGAGGACAATTCTGTTGAAGCAGTGTATGATCATTCCCCACTGGACTCGGTTGTGATGACAACAAATTACCAAGAGGATTTAGGGACTACAGATGGGCAATCTGAGAAAATCTCTTCCATGAACCCATCAAAACACCAAACTGGAAGAAACTCAATGCTCTCTGCAAATATATCTGATGGTGCAGCTGTAGGTCGCAAGGTTGCCAGAAATACTACTTCAAAGAAGGAAAGAAAGAAGACAGGGAAACGCAATGGAATGGTTAGTGTTGAAACGGCAGAGGACCACCTGGTTAAGTATAAAATGCCAAAACCTGGAAGCATATCTTCTATGCAGATTTTAGAAAGTCAGGATGAAGACAATATAACTCTTGCTAGATTTATACGCAATATATCAAACAAACAGTTTAAAAATACCGATCAAATGACTCAGGCTGCTTCCTATGCTAGTAGTTTCGTAAAAAAATCACGGAGATCTCGTCGGGCTGCCAAAAGAACTTGTGATTACATGCCTTTTAGTTTGAAGAAGGGACATGAATTGCTTTCTGAAGAAGTGCGCCACGGTCATGACAGAAACCAAGAAATGTCGTTCATGCAAGACAAGAATTTAGATGAAGGTTGTATTGATGTTACACCAGGGACTCTATTGGTCCACAATCATTCTTCCAATTTGAAGAACATGTCAATCATTGAAGCTGATGACAATGGGAAGGCAATGTCAGAGCTAGTCTGCGAGCAGACTATGTTTTTGGATGGTGCTATGGAACCCAAAAACATTGGAGAGAATGTGCCTACTGATGTTACCCTTGCTTCTTTTCTGAAAAAGAAGAAAATCAAGAAGGGCAAGGCAATATCAGAGCCAGTTGATGAGCAAGCTATAGATTTGAATTTTTTGACAGAAGCGGAAAACACGAGGGGTGGAGAGGATGGGTCTCTCAACGTTACTCTTGCTTCCTTGCTGAAAAAGAAAGGAAGGAGAGAGGGTAGAACAACCAAACGGAGCATTCGTCCCTCATAA 3189 0.4346 MAPRADENDEDDLSSGEDDDGFKEDMEALARACMIAGTNPDGIKPSSTVAPDDDYNADAVVPKASDPLLGPGDALVPVSDSDDEQRDLQYLKRVQELYQPSSFKPLKILPALSLSDDDEDDMETLRAIMRRFSAYERAGPDEDNVDKMAEGAHTSGLGSEEEFDNSVASKGLDPGESCPVSQDAIKTTSLLTTAEVERHPCNINERCEPKACKPSKLLDKRSRFPLSAQVFIDAIKKNRSFQKLLRNFQVSCIRRTGQAISLKKDPRILLISAKKSTASSTTKINDKKISPMCYGPAENAHVAKYRMVLERSPFSLDRKKWSSVERENLAKGIKQQFQEILLQMSINQDSSEWSCGYANNFDNMLVSIKDLEITPENIRKFLPEFNWDQLASKYVTGRTGAECEARWLNCEDPLINHSPWTCEEDKLLLHIIQEIGNRDWFKIAALLNTNRTPFQCLARYQRSLNPAMLNSEWTEEEDAQLCYAVSIFGVSNWQSVASVLERRTGTQCSNRWKKSLCPDRKGSFTAEEDERLTVAVHLFGRKWNQIAKFVPGRTQAQCRDRYVNSLDPSLKWGGWTKEEDSRLKKAIAKHGFFWSKVAADVPPRTDSQCRKRWRVLCPDQVPMLQEARKMQKSALISNFVDRESERPCLSLNDFLPLAMIDPPPDPDAVSLPQKRKSKSSNASKKKRPQKRAKKAQSCLKKAQVDKVEPCSGHGVHKPKIIGSHLEDNSVEAVYDHSPLDSVVMTTNYQEDLGTTDGQSEKISSMNPSKHQTGRNSMLSANISDGAAVGRKVARNTTSKKERKKTGKRNGMVSVETAEDHLVKYKMPKPGSISSMQILESQDEDNITLARFIRNISNKQFKNTDQMTQAASYASSFVKKSRRSRRAAKRTCDYMPFSLKKGHELLSEEVRHGHDRNQEMSFMQDKNLDEGCIDVTPGTLLVHNHSSNLKNMSIIEADDNGKAMSELVCEQTMFLDGAMEPKNIGENVPTDVTLASFLKKKKIKKGKAISEPVDEQAIDLNFLTEAENTRGGEDGSLNVTLASLLKKKGRREGRTTKRSIRPS 1062
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1752g0003 1062 SUPERFAMILY Homeodomain-like 546 620 IPR009057 -
Prci1752g0003 1062 SUPERFAMILY Homeodomain-like 469 562 IPR009057 -
Prci1752g0003 1062 MobiDBLite consensus disorder prediction 38 57 - -
Prci1752g0003 1062 Gene3D - 418 468 - -
Prci1752g0003 1062 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 412 468 IPR017930 -
Prci1752g0003 1062 MobiDBLite consensus disorder prediction 663 700 - -
Prci1752g0003 1062 ProSiteProfiles Myb-like domain profile. 412 464 IPR001005 -
Prci1752g0003 1062 Pfam Myb-like DNA-binding domain 420 481 - -
Prci1752g0003 1062 Pfam Myb-like DNA-binding domain 524 583 - -
Prci1752g0003 1062 PANTHER SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 4 15 1016 - -
Prci1752g0003 1062 Gene3D - 471 519 - -
Prci1752g0003 1062 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 521 561 IPR017930 -
Prci1752g0003 1062 ProSiteProfiles SANT domain profile. 519 564 IPR017884 -
Prci1752g0003 1062 Gene3D - 520 572 - -
Prci1752g0003 1062 Gene3D - 314 417 - -
Prci1752g0003 1062 MobiDBLite consensus disorder prediction 678 697 - -
Prci1752g0003 1062 Gene3D - 573 619 - -
Prci1752g0003 1062 ProSiteProfiles Myb-like domain profile. 567 617 IPR001005 -
Prci1752g0003 1062 MobiDBLite consensus disorder prediction 754 775 - -
Prci1752g0003 1062 MobiDBLite consensus disorder prediction 1 26 - -
Prci1752g0003 1062 CDD SANT 575 616 IPR001005 -
Prci1752g0003 1062 MobiDBLite consensus disorder prediction 63 82 - -
Prci1752g0003 1062 MobiDBLite consensus disorder prediction 789 809 - -
Prci1752g0003 1062 SUPERFAMILY Homeodomain-like 392 461 IPR009057 -
Prci1752g0003 1062 SMART sant 520 568 IPR001005 -
Prci1752g0003 1062 SMART sant 571 619 IPR001005 -
Prci1752g0003 1062 SMART sant 416 466 IPR001005 -
Prci1752g0003 1062 SMART sant 317 413 IPR001005 -
Prci1752g0003 1062 SMART sant 469 518 IPR001005 -
Prci1752g0003 1062 CDD SANT 472 516 IPR001005 -
Prci1752g0003 1062 MobiDBLite consensus disorder prediction 152 179 - -
Prci1752g0003 1062 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 567 621 IPR017930 -
Prci1752g0003 1062 ProSiteProfiles Myb-like domain profile. 520 566 IPR001005 -
Prci1752g0003 1062 ProSiteProfiles Myb-like domain profile. 465 516 IPR001005 -
Prci1752g0003 1062 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 473 520 IPR017930 -
Prci1752g0003 1062 CDD SANT 523 566 IPR001005 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1752g0003 222 698 MYB-Related Transcription Factor Family AT3G18100 51.272 4.20e-169 511
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci1752g0003 Myb_DNA-bind_6 1.3e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1752g0003 K09422 - gmx:778073 788.875