Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1752g0002 ATGGCTCCTCGTGCCGACGAAAACGACGAAGATGACCTCTCCTCCGGCGAAGACGATGACGGTTTCAAGGAGGACATGGAAGCCCTCGCACGAGCCTGCATGATCGCCGGCACTAACCCCGATGGTATTAAACCATCTTCTACTGTCGCTCCCGACGATGATTATAATGCAGACGCGGTGGTTCCCAAAGCATCGGACCCGCTGTTGGGCCCCGGCGATGCTCTCGTCCCCGTGTCAGACTCTGACGACGAGCAGAGGGACCTTCAGTATCTCAAAAGAGTGCAGGAGCTTTACCAGCCTTCGTCATTCAAGCCATTGAAAATTCTTCCGGCGCTTTCTTTGTCTGATGATGATGAAGATGACATGGAAACCCTCCGTGCCATTATGAGACGCTTTTCTGCTTATGAAAGAGGCCCTGATGAAGATAATGTGGATAAAATGGCTGAGGGAGCTCATACCTCAGGTCTAGGCTCTGAGGAGGAATTTGATAACAGCGTGGCATCTAAGGGATTAGATCCCGGTGAATCATGCCCTGTTTCTCAGGATGCTATTAAGACCACCAGTTTATTAACTACTGCTGAAGTTGAGAGACATCCTTGTAACATCAATGAAAGGTGTGAACCCAAGGCTTGCAAGCCATCCAAGTTACTGGACAAAAGATCAAGATTTCCTTTGTCTGCTCAGGTTTTTATTGATGCAATCAAGAAGAATAGATCTTTCCAGAAGTTACTGCGAAGTAAGTTGATTCAGATGGAAGCAAAAATTCAAGAAAACAAACAGTTAAGGGAAAGAGTTAAACTTCTTAAAGATTTTCAGGTTTCATGCATAAGAAGAACAGGGCAAGCTATATCACTGAAAAAGGATCCCCGCATACTGTTAATATCAGCAAAAAAGTCTACTGCTTCAAGTACCACAAAGATTAATGATAAAAAAATATCTCCAATGTGTTATGGCCCAGCTGAGAATGCTCATGTTGCTAAATATAGGATGGTGTTGGAACGATCTCCATTCTCATTGGATCGGAAAAAGTGGTCTAGTGTGGAGAGGGAGAATCTTGCTAAGGGAATAAAGCAACAATTTCAAGAAATTTTGCTTCAAATGTCAATAAATCAAGACAGTTCAGAGTGGTCGTGTGGATATGCAAATAACTTTGATAACATGCTTGTATCTATTAAAGATCTTGAGATTACGCCAGAGAACATCAGAAAGTTTCTGCCTGAATTCAATTGGGATCAGTTGGCTTCCAAGTATGTTACTGGTCGTACTGGTGCAGAATGTGAAGCAAGGTGGTTAAATTGTGAAGATCCATTGATCAATCATAGTCCATGGACATGTGAGGAGGACAAGTTGCTTTTGCATATAATCCAAGAGATTGGCAATAGGGACTGGTTTAAAATTGCTGCATTGCTGAACACAAATAGGACCCCATTTCAGTGCTTGGCACGATACCAAAGGAGTTTAAATCCTGCCATGCTAAATAGTGAATGGACTGAGGAAGAAGATGCTCAACTTTGTTATGCTGTCTCAATTTTTGGTGTCAGCAATTGGCAGTCTGTTGCTTCTGTTTTAGAACGAAGGACGGGAACTCAATGCTCTAATAGATGGAAGAAGTCACTCTGTCCTGATAGGAAAGGGAGCTTTACTGCAGAAGAAGATGAGCGCTTAACAGTGGCCGTCCATCTCTTTGGACGGAAATGGAATCAGATAGCTAAATTTGTTCCTGGCCGGACCCAAGCTCAGTGCAGAGACAGATACGTCAATAGTTTGGATCCCTCCTTGAAATGGGGTGGATGGACTAAGGAAGAAGATTCAAGGTTGAAAAAAGCAATTGCCAAACATGGATTCTTCTGGTCAAAGGTTGCTGCAGATGTGCCTCCACGAACTGACAGTCAATGCAGGAAGAGATGGCGGGTTCTATGTCCTGACCAAGTCCCTATGCTTCAAGAAGCTAGAAAGATGCAAAAATCTGCTTTAATCAGTAACTTTGTTGATCGGGAGTCTGAACGGCCGTGCCTTTCTCTAAATGATTTTCTTCCCTTGGCAATGATAGATCCACCACCTGATCCAGATGCTGTGAGCCTCCCTCAGAAGCGGAAGAGCAAGTCAAGCAATGCTTCCAAGAAGAAGAGGCCCCAAAAACGTGCAAAAAAGGCTCAAAGTTGTCTCAAGAAGGCACAGGTTGACAAGGTTGAGCCTTGTAGTGGGCATGGTGTCCACAAGCCAAAAATTATTGGATCGCATTTGGAGGACAATTCTGTTGAAGCAGTGTATGATCATTCCCCACTGGACTCGGTTGTGATGACAACAAATTACCAAGAGGATTTAGGGACTACAGATGGGCAATCTGAGAAAATCTCTTCCATGAACCCATCAAAACACCAAACTGGAAGAAACTCAATGCTCTCTGCAAATATATCTGATGGTGCAGCTGTAGGTCGCAAGGTTGCCAGAAATACTACTTCAAAGAAGGAAAGAAAGAAGACAGGGAAACGCAATGGAATGGTTAGTGTTGAAACGGCAGAGGACCACCTGGTTAAGTATAAAATGCCAAAACCTGGAAGCATATCTTCTATGCAGATTTTAGAAAGTCAGGATGAAGACAATATAACTCTTGCTAGATTTATACGCAATATATCAAACAAACAGTTTAAAAATACCGATCAAATGACTCAGGCTGCTTCCTATGCTAGTAGTTTCGTAAAAAAATCACGGAGATCTCGTCGGGCTGCCAAAAGAACTTGTGATTACATGCCTTTTAGTTTGAAGAAGGGACATGAATTGCTTTCTGAAGAAGTGCGCCACGGTCATGACAGAAACCAAGAAATGTCGTTCATGCAAGACAAGAATTTAGATGAAGGTTGTATTGATGTTACACCAGGGACTCTATTGGTCCACAATCATTCTTCCAATTTGAAGAACATGTCAATCATTGAAGCTGATGACAATGGGAAGGCAATGTCAGAGCTAGTCTGCGAGCAGACTATGTTTTTGGATGGTGCTATGGAACCCAAAAACATTGGAGAGAATGTGCCTACTGATGTTACCCTTGCTTCTTTTCTGAAAAAGAAGAAAATCAAGAAGGGCAAGGCAATATCAGAGCCAGTTGATGAGCAAGCTATAGATTTGAATTTTTTGACAGAAGCGGAAAACACGAGGGGTGGAGAGGATGGGTCTCTCAACGTTACTCTTGCTTCCTTGCTGAAAAAGAAAGGAAGGAGAGAGGGTAGAACAACCAAACGGAGCATTCGTCCCTCATAA 3258 0.4316 MAPRADENDEDDLSSGEDDDGFKEDMEALARACMIAGTNPDGIKPSSTVAPDDDYNADAVVPKASDPLLGPGDALVPVSDSDDEQRDLQYLKRVQELYQPSSFKPLKILPALSLSDDDEDDMETLRAIMRRFSAYERGPDEDNVDKMAEGAHTSGLGSEEEFDNSVASKGLDPGESCPVSQDAIKTTSLLTTAEVERHPCNINERCEPKACKPSKLLDKRSRFPLSAQVFIDAIKKNRSFQKLLRSKLIQMEAKIQENKQLRERVKLLKDFQVSCIRRTGQAISLKKDPRILLISAKKSTASSTTKINDKKISPMCYGPAENAHVAKYRMVLERSPFSLDRKKWSSVERENLAKGIKQQFQEILLQMSINQDSSEWSCGYANNFDNMLVSIKDLEITPENIRKFLPEFNWDQLASKYVTGRTGAECEARWLNCEDPLINHSPWTCEEDKLLLHIIQEIGNRDWFKIAALLNTNRTPFQCLARYQRSLNPAMLNSEWTEEEDAQLCYAVSIFGVSNWQSVASVLERRTGTQCSNRWKKSLCPDRKGSFTAEEDERLTVAVHLFGRKWNQIAKFVPGRTQAQCRDRYVNSLDPSLKWGGWTKEEDSRLKKAIAKHGFFWSKVAADVPPRTDSQCRKRWRVLCPDQVPMLQEARKMQKSALISNFVDRESERPCLSLNDFLPLAMIDPPPDPDAVSLPQKRKSKSSNASKKKRPQKRAKKAQSCLKKAQVDKVEPCSGHGVHKPKIIGSHLEDNSVEAVYDHSPLDSVVMTTNYQEDLGTTDGQSEKISSMNPSKHQTGRNSMLSANISDGAAVGRKVARNTTSKKERKKTGKRNGMVSVETAEDHLVKYKMPKPGSISSMQILESQDEDNITLARFIRNISNKQFKNTDQMTQAASYASSFVKKSRRSRRAAKRTCDYMPFSLKKGHELLSEEVRHGHDRNQEMSFMQDKNLDEGCIDVTPGTLLVHNHSSNLKNMSIIEADDNGKAMSELVCEQTMFLDGAMEPKNIGENVPTDVTLASFLKKKKIKKGKAISEPVDEQAIDLNFLTEAENTRGGEDGSLNVTLASLLKKKGRREGRTTKRSIRPS 1085
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1752g0002 1085 MobiDBLite consensus disorder prediction 701 720 - -
Prci1752g0002 1085 ProSiteProfiles Myb-like domain profile. 590 640 IPR001005 -
Prci1752g0002 1085 ProSiteProfiles Myb-like domain profile. 435 487 IPR001005 -
Prci1752g0002 1085 MobiDBLite consensus disorder prediction 777 798 - -
Prci1752g0002 1085 CDD SANT 598 639 IPR001005 -
Prci1752g0002 1085 MobiDBLite consensus disorder prediction 38 57 - -
Prci1752g0002 1085 MobiDBLite consensus disorder prediction 812 832 - -
Prci1752g0002 1085 CDD SANT 546 589 IPR001005 -
Prci1752g0002 1085 CDD SANT 495 539 IPR001005 -
Prci1752g0002 1085 PANTHER SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 4 15 1039 - -
Prci1752g0002 1085 SMART sant 543 591 IPR001005 -
Prci1752g0002 1085 SMART sant 594 642 IPR001005 -
Prci1752g0002 1085 SMART sant 439 489 IPR001005 -
Prci1752g0002 1085 SMART sant 340 436 IPR001005 -
Prci1752g0002 1085 SMART sant 492 541 IPR001005 -
Prci1752g0002 1085 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 544 584 IPR017930 -
Prci1752g0002 1085 Gene3D - 441 491 - -
Prci1752g0002 1085 Gene3D - 494 542 - -
Prci1752g0002 1085 MobiDBLite consensus disorder prediction 138 178 - -
Prci1752g0002 1085 ProSiteProfiles Myb-like domain profile. 488 539 IPR001005 -
Prci1752g0002 1085 SUPERFAMILY Homeodomain-like 492 585 IPR009057 -
Prci1752g0002 1085 MobiDBLite consensus disorder prediction 1 26 - -
Prci1752g0002 1085 ProSiteProfiles Myb-like domain profile. 543 589 IPR001005 -
Prci1752g0002 1085 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 590 644 IPR017930 -
Prci1752g0002 1085 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 496 543 IPR017930 -
Prci1752g0002 1085 Gene3D - 543 595 - -
Prci1752g0002 1085 Gene3D - 337 440 - -
Prci1752g0002 1085 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 435 491 IPR017930 -
Prci1752g0002 1085 MobiDBLite consensus disorder prediction 63 82 - -
Prci1752g0002 1085 Coils Coil 244 264 - -
Prci1752g0002 1085 SUPERFAMILY Homeodomain-like 569 643 IPR009057 -
Prci1752g0002 1085 Pfam Myb-like DNA-binding domain 547 606 - -
Prci1752g0002 1085 Pfam Myb-like DNA-binding domain 443 504 - -
Prci1752g0002 1085 Gene3D - 596 642 - -
Prci1752g0002 1085 ProSiteProfiles SANT domain profile. 542 587 IPR017884 -
Prci1752g0002 1085 MobiDBLite consensus disorder prediction 686 723 - -
Prci1752g0002 1085 SUPERFAMILY Homeodomain-like 415 484 IPR009057 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1752g0002 221 721 MYB-Related Transcription Factor Family AT3G18100 53.033 0.0 544
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci1752g0002 Myb_DNA-bind_6 1.3e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1752g0002 K09422 - gmx:778073 840.491