Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci174g0005 ATGCATAAAAGTGTACTCCCTCCGATCCACTTTATTGATCACCTTCTAGAAAGGGAGGGTAAATGGGATGAATGTATGCTTCTTACATTATTTGACGTTGGCTTGCTACAACTGACATCTTGTGGCTTTGCAGAGCCTTGTGAGCATGCCTTCTGCTTTGATTGTGCTAGAAGTGATTTAATGTGCTGCCTGTGTGATGAACGAATCCAGAAGATTCAGGCCATCAAAATGATGGAAGGAATTTTTGTTTGCGCTGCTCCTCATTGTCTCAAGTCTTTCTTGAAGAAGACTGAATTTGAATCTCACATTCAAGACAACCATTCTGATCTTCTTCAGCCCAATGCAGATAGAGAAGAAGGAAATGAGTCAGAGGCACAGAGTTTTAGGCAATCTACAGCATCAGACACCGCTGTTCAAGGTTCCCAGAGGCCAGTTTTTTCTCCTGGTTCAAAGTCGCAGCTTCATCATTGGAAAGACAAAAGTCGTCAACAGCCAATGAGAGAGCAATCCCCTTCAAGGCCAATTCAACAGCCAAAGCCACCTTTTTTTTGA 552 0.4293 MHKSVLPPIHFIDHLLEREGKWDECMLLTLFDVGLLQLTSCGFAEPCEHAFCFDCARSDLMCCLCDERIQKIQAIKMMEGIFVCAAPHCLKSFLKKTEFESHIQDNHSDLLQPNADREEGNESEAQSFRQSTASDTAVQGSQRPVFSPGSKSQLHHWKDKSRQQPMREQSPSRPIQQPKPPFF 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci174g0005 183 ProSiteProfiles Zinc finger C2H2 type domain profile. 82 108 IPR013087 -
Prci174g0005 183 PANTHER E3 UBIQUITIN-PROTEIN LIGASE HAKAI-RELATED 45 182 IPR040383 GO:0016567|GO:0061630
Prci174g0005 183 MobiDBLite consensus disorder prediction 109 183 - -
Prci174g0005 183 MobiDBLite consensus disorder prediction 109 124 - -
Prci174g0005 183 ProSitePatterns Zinc finger RING-type signature. 47 56 IPR017907 -
Prci174g0005 183 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 34 82 IPR013083 -
Prci174g0005 183 MobiDBLite consensus disorder prediction 125 149 - -
Prci174g0005 183 ProSitePatterns Zinc finger C2H2 type domain signature. 84 107 IPR013087 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci174g0005 46 143 C2H2 Transcription Factor Family AT5G01160 62.626 3.11e-40 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci174g0005 K15685 - pcin:129295732 388.652