Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci174g0004 ATGGACGATTGGGAGGGTAAATGGGATGAATGTATGCTTCTTACATTATTTGACGTTGGCTTGCTACAACTGACATCTTGTGGCTTTGCAGAGCCTTGTGAGCATGCCTTCTGCTTTGATTGTGCTAGAAGTGATTTAATGTGCTGCCTGTGTGATGAACGAATCCAGAAGATTCAGGCCATCAAAATGATGGAAGGAATTTTTGTTTGCGCTGCTCCTCATTGTCTCAAGTCTTTCTTGAAGAAGACTGAATTTGAATCTCACATTCAAGACAACCATTCTGATCTTCTTCAGCCCAATGCAGATAGAGAAGAAGGAAATGAGTCAGAGGCACAGAGTTTTAGGCAATCTACAGCATCAGACACCGCTGTTCAAGGTTCCCAGAGGCCAGTTTTTTCTCCTGGTTCAAAGTCGCAGCTTCATCATTGGAAAGACAAAAGTCGTCAACAGCCAATGAGAGAGCAATCCCCTTCAAGGCCAATTCAACAGCCAAAGCCACCTTTTTTTTGA 510 0.4333 MDDWEGKWDECMLLTLFDVGLLQLTSCGFAEPCEHAFCFDCARSDLMCCLCDERIQKIQAIKMMEGIFVCAAPHCLKSFLKKTEFESHIQDNHSDLLQPNADREEGNESEAQSFRQSTASDTAVQGSQRPVFSPGSKSQLHHWKDKSRQQPMREQSPSRPIQQPKPPFF 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci174g0004 169 ProSitePatterns Zinc finger C2H2 type domain signature. 70 93 IPR013087 -
Prci174g0004 169 MobiDBLite consensus disorder prediction 91 169 - -
Prci174g0004 169 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 20 68 IPR013083 -
Prci174g0004 169 ProSiteProfiles Zinc finger C2H2 type domain profile. 68 94 IPR013087 -
Prci174g0004 169 MobiDBLite consensus disorder prediction 91 110 - -
Prci174g0004 169 PANTHER E3 UBIQUITIN-PROTEIN LIGASE HAKAI-RELATED 31 168 IPR040383 GO:0016567|GO:0061630
Prci174g0004 169 MobiDBLite consensus disorder prediction 111 135 - -
Prci174g0004 169 ProSitePatterns Zinc finger RING-type signature. 33 42 IPR017907 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci174g0004 32 129 C2H2 Transcription Factor Family AT5G01160 62.626 1.21e-40 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci174g0004 K15685 - pcin:129295732 350.903