Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1737g0004 ATGTTGGATCTTAATCTCAACGTCGTTTCCTCTGACTCTGCGTCGAATTCCGTCGACGTGCCTCCTGAGAATGTTTTACTGCTTTCTGGTAGCCAAATGGATAGCTCCGGAAGCTTTAATTCTTCCATCGTCAATGCCGATACCTCCGCCAATACTTTTGACGAAGACTCTTGCTCTTATGATGATGCCTTTGCATACAACTTTGGAAAAGTGAAGAAGAATAACATAGATGATGGCACAAGCTACAAAGCAGTTGATCTTCCAGTAGGTGAAGGTGTTGATGGCTGTAATCGGACCATCCAGCTTTTTCCGATCTTCGGTGCCGAAGAGAGTCGTGTCACTGAATTGGGAATCGGTCAGCGATTTCCAGCTTCGGCTTCAAGTAAGGGATGGTTGGATTTCTTGTGCAAGGAGGTGGGTCCCCGTGGAACGCCGGAACAGAGGATGCTGCCGCCGCCGCAGCAGAGGCCGCAGGTCAAGAAGAGTCGGAGGGGACCGAGGTCGCGGAGCTCACAGTACCGCGGTGTTACATTTTATAGGAGGACTGGAAGATGGGAATCGCATATATGGGATTGTGGGAAACAAGTGTACCTGGGCGGATTTGATACAGCACATGCTGCAGCAAGGGCATATGATCGAGCCGCAATCAAGTTCCGTGGCCTTGATGCTGATATTAATTTCAATGTTAGTGATTATGAGGAGGATATAAAGCAGATGAGTAATTTCACAAAGGAAGAGTTTGTGCATATTCTGCGGCGACAGAGCACTGGCTTTTCAAGGGGAAGCTCTAAATATAGAGGAGTTACTCTACATAAATGTGGGCGATGGGAAGCTCGCATGGGGCAGTTTCTAGGGAAGAAGTATATATATCTCGGGCTATTTGATAGCGAAATAGAGGCTGCAAGGGCGTATGATAAAGCGGCCATAAAATGCAATGGGAGGGAAGCGATGACGAACTTTGAGCCAAGCTCATACGAAGGGGAGATAATATCTCAGGCAGATAATGAAGATGGCAACCCAAATCTTGATCTTAGCTTGGCCATTGCTCCCCCTGTTTACTCTGATGATTTTCAAGTCCCGCACGGCTGGCCCAATCTGCCCGTTGATGGGAGAGTTGCGTTTGAGAACTCTGCATCAAGGTTATTGAAGGGTCAACCGTCTCATGTTTTCCCGATAGCTACCCAGCATCCTTCTGTCAGGAATAGAACTGATTTCTTTCCCATTAATCAGGAAAGAGCAATGGAGAAAAGGATGGAAGCTAATCCTCTGCCAAACTGGGTATTTCAATACCAAGGTCCATATGGCGAGGCAAGTTTGATTCCATCCTTCTCTGCTGCAGCATCATCAGGATTCCCTTCAACAAGGTTACCACCAACAGCAGCAGCTGATAGTCAGATTCATTTCCAAACATGA 1413 0.472 MLDLNLNVVSSDSASNSVDVPPENVLLLSGSQMDSSGSFNSSIVNADTSANTFDEDSCSYDDAFAYNFGKVKKNNIDDGTSYKAVDLPVGEGVDGCNRTIQLFPIFGAEESRVTELGIGQRFPASASSKGWLDFLCKEVGPRGTPEQRMLPPPQQRPQVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGLDADINFNVSDYEEDIKQMSNFTKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEIEAARAYDKAAIKCNGREAMTNFEPSSYEGEIISQADNEDGNPNLDLSLAIAPPVYSDDFQVPHGWPNLPVDGRVAFENSASRLLKGQPSHVFPIATQHPSVRNRTDFFPINQERAMEKRMEANPLPNWVFQYQGPYGEASLIPSFSAAASSGFPSTRLPPTAAADSQIHFQT 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1737g0004 470 ProSiteProfiles AP2/ERF domain profile. 264 321 IPR001471 GO:0003700|GO:0006355
Prci1737g0004 470 PRINTS Ethylene responsive element binding protein signature 265 276 IPR001471 GO:0003700|GO:0006355
Prci1737g0004 470 PRINTS Ethylene responsive element binding protein signature 303 323 IPR001471 GO:0003700|GO:0006355
Prci1737g0004 470 Pfam AP2 domain 263 313 IPR001471 GO:0003700|GO:0006355
Prci1737g0004 470 Pfam AP2 domain 172 220 IPR001471 GO:0003700|GO:0006355
Prci1737g0004 470 FunFam AP2-like ethylene-responsive transcription factor 171 230 - -
Prci1737g0004 470 MobiDBLite consensus disorder prediction 142 173 - -
Prci1737g0004 470 MobiDBLite consensus disorder prediction 451 470 - -
Prci1737g0004 470 Gene3D AP2/ERF domain 263 322 IPR036955 GO:0003700|GO:0006355
Prci1737g0004 470 Gene3D AP2/ERF domain 171 230 IPR036955 GO:0003700|GO:0006355
Prci1737g0004 470 CDD AP2 172 230 IPR001471 GO:0003700|GO:0006355
Prci1737g0004 470 CDD AP2 263 323 IPR001471 GO:0003700|GO:0006355
Prci1737g0004 470 SUPERFAMILY DNA-binding domain 171 230 IPR016177 GO:0003677
Prci1737g0004 470 SMART rav1_2 172 234 IPR001471 GO:0003700|GO:0006355
Prci1737g0004 470 SMART rav1_2 264 327 IPR001471 GO:0003700|GO:0006355
Prci1737g0004 470 ProSiteProfiles AP2/ERF domain profile. 172 228 IPR001471 GO:0003700|GO:0006355
Prci1737g0004 470 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 141 342 - -
Prci1737g0004 470 FunFam AP2-like ethylene-responsive transcription factor 263 323 - -
Prci1737g0004 470 SUPERFAMILY DNA-binding domain 263 322 IPR016177 GO:0003677
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1737g0004 159 347 AP2-EREBP Transcription Factor Family AT4G36920 80.513 2.51e-94 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Prci1737g0004 AP2 1.1e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1737g0004 K09284 - qsa:O6P43_006713 601.282