Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1736g0002 ATGTTTGTGGGCTTATTATGCCTCATTACCCTAACCATAACTGAGTCTGCAACTGAAGGAGGAAGCGGTGGAAGAAGAATAAGAAGACGATCCCCTGTAGATGTATCAGTAGGGGTGATTCTGGACTTGAATTCATCACTTGGTCACATGGCTCTTAACTGCACCAACTTCGGACTCCAAGATTTCTATTCCACAAATGATCCTTATACCACCAAGCTCCGACTTCTTTTCAGGGATTCTAGAAACGACGTCCTCACCGCAGCTTCTGTAGCTAGGGATCTAATAATTAAGGAAAAGGTGCAAGCAATCCTAGGACCTCAAAACTCAGAGCAAGCAAGGTTTGTTGTAGAACTTGGTTTCAAGTATCATGTTCCTGTGATCTGGTTTCCTCCATCTGGTCCATCTCTTTTGCCGCCTCGCTCCCGATTCTTCATTCACTCCTACCTCGTCAGAAGCCATTGCTTTCAGTTCAGAGCCATAGCAGCCATTATCGAAGCTTATAATTGGCAGTCTGTGATCCCCATTTATGAAGAGCCAGAATTCGGCTACGACCTCATTCCATGTCTCACTTATGCTATGGAAGAAATGGACACTCGAGTGCCTTACATAAGTGCCATAAATCAAAATTTCAACGAGACTCAAGTCGAAAACGAGCTTAAAAAGTTCAAAGACAAGCGAACATATGTGTTTCTTGTCCACATGACCGTGGAGCTATGGTCAAGACTCGTGAAAGTTGCATACAAAGCAGGGATGATGAGTAAAGGATATGCTTGGATACTTACCCAAGGGTTATCTTCTGTGATGGATCCCGAAGCTAAAGATATTAAAGTGAAAGGCTACATGGATGGTGCATTGGGTGTGGGGCCATCGGTAGTTTCCAACAAAAATGACATAATAAGTAAGCGCAGGTACGTAGCGAGAAGATTACTGAATTACAACAAAACTCTCTCTCTCTATGGCTTGTGGGCTTATGACACTGTCACAGCATTGGCCAACGCAGTGGAGAATTCCGGCTTAGTGAATTATAATGAAAGCAGAGTTGACCTTGTAGATGAAGATCTAGGAATGCGTAATGAAACAGGCCAAAAACTTCGCAGAGCAATTATGCATACTAATTTCCCAGGCCTATCGGGGAATTTCAGTTTATGGCAAGGACAGCTAAAACCATCAACAGTTGTAGTGTACAATGTGAAAGGACTAACCGATACTATCATTGGAAGTTGGAGCCCCAGAACAGGACTTGCTCGCTACAAACTAATGGATCCGATCAGATGGCCTGGTAACACAACAGACAGACCACCAAAGTTGAAAATCGGAGTCCCAAAGACACATTTTACTGAATTTGTTGATGTTAGTGGAGAATGGCCGAATATGTCTTTTGATGGCTTTGCTATTCATGTGTTCAAGAAAGTGGTTGATGTTTTGCCATTTCCTTTAAATTATGAGTTTGTGCCAGTCAACATCAACGCAGAGAGGACTCCATCAAGCTACGATGATCTTCTCTGCAGTATCACAGACAAGAATGTTGATGTTGATGTTATAATTGGAGATGTTACAATTGTAGCGAATCGCACAAACTGTGTTGACTTCACATTGCCGTATCTAGATTCAAGCGTGTCCATGGTGGTAAAGGTGAGGTCCGACACCAAAAGTCGGTGGATCCTCTTCAAACCTTTTGATTGGTTACTTTGGTTAATTCTTGGTGTGATTTTTGTGGGCGCAACTGTGATTGTAATTATATTAGAAAAAAAAACCAAGGCTGATCCTGAAAGCCAATTCCAGAACTTTGTCCGCAATCCCTTCCTCATTTACATGAGCGATATTGGTTCTCTGAAAAGTGGGACGTCTAAATGGGTGGTGATAGTGATCACGTTTCTGTTGGGGCTAGCGTTGCAAGTTTACACAGCAAATTTGACATCAATTTTAACAGAGCGGACAACGGCAAAACCTTCTCCATGGAGGGACGTGCAAGAGATTAAAAGGAACAATCTGTCAGTGGGATATCAAAAGGATTCCTGGGTGAAAGGCCTTCTCATTCACCAGCTAGGACTCAATGAAGAACAGTTAAAGCCTTATGCAAGCCCTGACGAGTACAATCATGCATTGTCAACCAAAAAAGATGGCGTGGATGTTATTTTTGATGAAATTCCTTATCTCACGCTCTTCCTTTCCAGTTGCCCTTCTTGCAAGATGACAGGACCAATCTACAAAAGTGGTGGATTTTCCTTTGCATTCCCAAAGAATTCTACCTTGGTCTTAAATTTCTCAGCTGCAATATTGAATGTAACTCAAAATGTGACGACATTTCGTAACATGAAGAAGGAAATATTGTTACCCGTCACCATTGATAGATCTGAATACAAAAGTGATGTTGAGATGCGAAGTTTGAAGATAGATGACTTCGGAGGCCTTTTCCCGATAGCATTATTTGTTTTAGTTCTCTTCTTCAGCCTTTCAATTCTTAGAGTTCTTAAAGTTCCACCAATCACTCCCTGGCTGCATAAGAAATTGGTTCCATTTTCAAGTGCGTAG 2532 0.4202 MFVGLLCLITLTITESATEGGSGGRRIRRRSPVDVSVGVILDLNSSLGHMALNCTNFGLQDFYSTNDPYTTKLRLLFRDSRNDVLTAASVARDLIIKEKVQAILGPQNSEQARFVVELGFKYHVPVIWFPPSGPSLLPPRSRFFIHSYLVRSHCFQFRAIAAIIEAYNWQSVIPIYEEPEFGYDLIPCLTYAMEEMDTRVPYISAINQNFNETQVENELKKFKDKRTYVFLVHMTVELWSRLVKVAYKAGMMSKGYAWILTQGLSSVMDPEAKDIKVKGYMDGALGVGPSVVSNKNDIISKRRYVARRLLNYNKTLSLYGLWAYDTVTALANAVENSGLVNYNESRVDLVDEDLGMRNETGQKLRRAIMHTNFPGLSGNFSLWQGQLKPSTVVVYNVKGLTDTIIGSWSPRTGLARYKLMDPIRWPGNTTDRPPKLKIGVPKTHFTEFVDVSGEWPNMSFDGFAIHVFKKVVDVLPFPLNYEFVPVNINAERTPSSYDDLLCSITDKNVDVDVIIGDVTIVANRTNCVDFTLPYLDSSVSMVVKVRSDTKSRWILFKPFDWLLWLILGVIFVGATVIVIILEKKTKADPESQFQNFVRNPFLIYMSDIGSLKSGTSKWVVIVITFLLGLALQVYTANLTSILTERTTAKPSPWRDVQEIKRNNLSVGYQKDSWVKGLLIHQLGLNEEQLKPYASPDEYNHALSTKKDGVDVIFDEIPYLTLFLSSCPSCKMTGPIYKSGGFSFAFPKNSTLVLNFSAAILNVTQNVTTFRNMKKEILLPVTIDRSEYKSDVEMRSLKIDDFGGLFPIALFVLVLFFSLSILRVLKVPPITPWLHKKLVPFSSA 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1736g0002 843 Gene3D - 71 389 - -
Prci1736g0002 843 Gene3D - 433 552 - -
Prci1736g0002 843 SUPERFAMILY Periplasmic binding protein-like I 34 427 IPR028082 -
Prci1736g0002 843 SUPERFAMILY Periplasmic binding protein-like II 432 765 - -
Prci1736g0002 843 SMART GluR_14 437 774 IPR001320 GO:0015276|GO:0016020
Prci1736g0002 843 Gene3D - 553 672 - -
Prci1736g0002 843 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 35 818 IPR015683 -
Prci1736g0002 843 Pfam Receptor family ligand binding region 61 398 IPR001828 -
Prci1736g0002 843 Pfam Bacterial extracellular solute-binding proteins, family 3 457 767 IPR001638 -
Prci1736g0002 843 PIRSF IGluLR_plant 1 826 IPR017103 -
Prci1736g0002 843 Gene3D - 152 414 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1736g0002 34 818 Ion Channels AT2G29100 33.738 8.04e-122 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1736g0002 K05387 - qsu:111985481 564.303