Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1736g0001 ATGGGCATACGAATGTTTAACGTCACTTCCATTCGTCCAATTATTTCATCAGATTTAGATGGAAAAATTAACAGAACTCTTTATCAAGAAAAAATTAACAGCACTCTTGACAAGTTAAACAACATGCGAACACATGTATTTCTTGTCCATATGAGCATGGATCTTGGGACAACATTTATTAGGTCTGCACAAAGAAAAGAGATGATGGGTGAAGGATACGCATGGATACTCACGCAAGAGCTATCTTCTTTGACAGAGCCTCTGGTTAAGGTTACGAGAACATTGATTCATAATGCAGGCCTACCTTCGGAATATTATACGAATTTTACGGATTCAATTCGTTTGAAGCGCTTCATGCAAGGTGCGTTGGGAGTGAAGCCAATGGATTCCAATAAATCAAAAGAGCGTAGGGAGAAAGAGAAGAATTTCAGGGAGAGGTTCAAAAGCACCCTAACTATCTATGGGTGGTGGGCTTATCACACAATCGAGGCATTGGCTAAGGCAGTACAGAAGACAAGCACAGACAAAGGCTCAAAACTTCGCGATAAAATTTTGGCTACTAACTTCAAAGGCTTGTCTGGGATCAATTTTAGTTTTAGAAAAGAACAGCTAGATCAATCGGTATTTGAAGTATACAATGTGATTGGAGACAGAGAAAGGATTATCGGAGCTTGGAGCCCTGAAACAGGACTTGTTCAAGATTACGGTAAAGTTGGTGATGAGACATCTGGTGAATACCGACTAAAGGATGCGCTGTGGCCGGGTGACACGATGGATAAGCCACCTAAGCTGAGAATTGGAGTCCCAAGAACAAATTCTTTTCCTGAATTAGTGAATGTAGGTAATTCAAGTAATACGACCAAGTTTGATGGCTTTGCTATTAATGTGTTCTTAAAAGCGGTCGATGTTTTGCCATTTCCGTTAAACAATTATGAGTTCGTTCCCCTGCCGAACGAAATCAGCAATGCTAACATGACCTACGATAATATTCTCTACAACCAAACGAAAATCGAGGAGCTTGACGCTATAATCGGAGACATCACAATTGTAGCAAGTCGCACAAAATGTGTTGATTTCACGTTGCCGTACTTGGATTCAAGTGTAGCCATGCTGGTAAAGGTGAAGAATGTCGCCACAAGTAGGGGGATCCTCTTCAAACCTTTCCATTGGTCACTATGGTTAATTCTTGGTGGGATTTTTGTGGGTGCAACTATTATCATAATTGTATTAGAAAGAAACAAAACAAAGGAATTTCGCTTCAACCCCTTTCTTGTTTACAAGATCGATGTTATGGAGAGTTTTGCAAGCAACGCTGCGGGGTGGATGGTGATACTGACGTCATTCCTGTTCATCTTAGTATTGCAAGTTTACACAGCGAATTTAACTTCAATTTTAACAGAAGGAAAACTGAAAGAGCCTTCATTTAAGGACGAAAAAGAGATTATTAAGAGGAGCAATCTGAGGGTGGGATATCAGAGAGGGTCGTGGGTGAGAGAGCTTCTGATTGAGCAAATAGGATTCATGGAGTTTCAGTTAAAGGGTTTACGAAGCCGTGAAGAGTACAGTGAATCATTGTGGAAAGGAACCGAGAAAGGAGGAGTGGATGCTATTTTTGACGAAACTCCTTATCTCACGCTCTTCCTCTCCAAATATAAATCTCGTTTTATGATGACAGGATCAATCTACAAAACTGGTGGATTTGCCTTTGCATTCCCGAAGAAATCGGGCTTGGTCTCGCATTTTTCGAATGCAATCTTAAATGTGACTCAAGATGTGGAGCCATTTCGTGTCCTGGTGGCCAAGAGCTTCTTGCCCACCTCCATTGAAGATTTGGAATTTCAAGACCAAGGTGATATAGAGACGACAAGTTTGAGCATAGCCAACTTTGGAGGGCTTTATCCTGTCCTAGTATCTGTTGCTGCTCTCTTATTGGGCCTTTCCATTCTGAATCCATCTGTGATTAAGTGGTTTCGTCGTGAGAAGCTGCTTTCAGTTTTAAGTTCGCTAAACAAAAAGAAGGAACACAATTAA 2031 0.4092 MGIRMFNVTSIRPIISSDLDGKINRTLYQEKINSTLDKLNNMRTHVFLVHMSMDLGTTFIRSAQRKEMMGEGYAWILTQELSSLTEPLVKVTRTLIHNAGLPSEYYTNFTDSIRLKRFMQGALGVKPMDSNKSKERREKEKNFRERFKSTLTIYGWWAYHTIEALAKAVQKTSTDKGSKLRDKILATNFKGLSGINFSFRKEQLDQSVFEVYNVIGDRERIIGAWSPETGLVQDYGKVGDETSGEYRLKDALWPGDTMDKPPKLRIGVPRTNSFPELVNVGNSSNTTKFDGFAINVFLKAVDVLPFPLNNYEFVPLPNEISNANMTYDNILYNQTKIEELDAIIGDITIVASRTKCVDFTLPYLDSSVAMLVKVKNVATSRGILFKPFHWSLWLILGGIFVGATIIIIVLERNKTKEFRFNPFLVYKIDVMESFASNAAGWMVILTSFLFILVLQVYTANLTSILTEGKLKEPSFKDEKEIIKRSNLRVGYQRGSWVRELLIEQIGFMEFQLKGLRSREEYSESLWKGTEKGGVDAIFDETPYLTLFLSKYKSRFMMTGSIYKTGGFAFAFPKKSGLVSHFSNAILNVTQDVEPFRVLVAKSFLPTSIEDLEFQDQGDIETTSLSIANFGGLYPVLVSVAALLLGLSILNPSVIKWFRREKLLSVLSSLNKKKEHN 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1736g0001 676 Gene3D - 103 206 - -
Prci1736g0001 676 Gene3D - 260 383 - -
Prci1736g0001 676 Gene3D - 384 502 - -
Prci1736g0001 676 Pfam Receptor family ligand binding region 31 216 IPR001828 -
Prci1736g0001 676 SMART GluR_14 265 594 IPR001320 GO:0015276|GO:0016020
Prci1736g0001 676 Pfam Bacterial extracellular solute-binding proteins, family 3 326 591 IPR001638 -
Prci1736g0001 676 SUPERFAMILY Periplasmic binding protein-like II 260 591 - -
Prci1736g0001 676 Gene3D - 5 102 - -
Prci1736g0001 676 SUPERFAMILY Periplasmic binding protein-like I 32 226 IPR028082 -
Prci1736g0001 676 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 27 648 IPR015683 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1736g0001 23 593 Ion Channels AT2G29120 33.597 1.81e-81 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1736g0001 K05387 - qsu:111985484 400.208