Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1727g0003 ATGTGTGAATTCGTTCAAACTATCATAAGTTTCTGCGAATCTGTGGTTATGTGCTGTTCCGAATGGGGAATGTGGAATCCCTGGATTGGATCGGTACCCAATTTAGAGGAATTAAACTACAATGTTATTGGCCCGGTTACAGACTGTACGTTGAACAAGGTTTACCGTTGTGTTAAAGCTGATGTCGATCAATCGATGGTATTCATCAAGGAGATTTTCATGCCTGACGGATATAATACAGCTGTTCAGACATCGATAAGTGCTAAAACGAGTTTTTTTCGATTCCACGGTCATCCAAACATTATAAGGGAGCTGCGTTCATTCAGGAGGGGGAATTACATGTATATTGTTTATGAGTATTTTTCCGTTGATCTTTCCAATTTCATTTCGTTTCCAAAGATCCAGAGAGATCCGCAGACAAGATTGATTCTTCAGCAGATACTCTCTGCCGTAAAACATTGTCATTCTTATGACATTATCCTCGGGGATATAAAACCAAAGTACATACAAATTAATTTCACTGCTCGTTTAATCAAGCTAGCTGACTTCGGTTTCGCCGGCGCATATGGAGATCCCTGGGCATCTTATCCTATAAAACCCTCCCAATACAGTGCTCCTGAACTCCTGTTTAGAACTCGTCAACATTCAAAGGCAGCTGATATGTGGTCTGTCGGCTGTATATTTGGAGAGCTGGTAATTGGGAAACCTGTATTCCAGGGCACAACTACAAGGGAACAATTGGTGTCAATTTTTCGTTTGTTAGGCACGCCAACTGAGGAATCCTGGCCAGGAGTGAGCAGGAAGTGTAGAACAATTTCATGCTTTCCCAAATATCAACCACAGAACCTGGCAGAAAATTTCCCTGGTTTGGAACCAGCGGGCATTGATCTTCTTTCCAAAATGCTTTGCCTGGATCCAAGAGAAAGAATTTCGGCTGAAGATGCTCTTGAGCACGGATACTTCAATTTTAACCAGAACTGA 981 0.419 MCEFVQTIISFCESVVMCCSEWGMWNPWIGSVPNLEELNYNVIGPVTDCTLNKVYRCVKADVDQSMVFIKEIFMPDGYNTAVQTSISAKTSFFRFHGHPNIIRELRSFRRGNYMYIVYEYFSVDLSNFISFPKIQRDPQTRLILQQILSAVKHCHSYDIILGDIKPKYIQINFTARLIKLADFGFAGAYGDPWASYPIKPSQYSAPELLFRTRQHSKAADMWSVGCIFGELVIGKPVFQGTTTREQLVSIFRLLGTPTEESWPGVSRKCRTISCFPKYQPQNLAENFPGLEPAGIDLLSKMLCLDPRERISAEDALEHGYFNFNQN 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1727g0003 326 Gene3D Phosphorylase Kinase; domain 1 36 135 - -
Prci1727g0003 326 SUPERFAMILY Protein kinase-like (PK-like) 53 322 IPR011009 -
Prci1727g0003 326 Pfam Protein kinase domain 53 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1727g0003 326 SMART serkin_6 40 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1727g0003 326 Gene3D Transferase(Phosphotransferase) domain 1 136 326 - -
Prci1727g0003 326 ProSiteProfiles Protein kinase domain profile. 40 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1727g0003 326 PANTHER CELL DIVISION PROTEIN KINASE 40 321 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1727g0003 39 322 Core Cell Cycle Gene Families AT3G48750 35.069 2.02e-57 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Prci1727g0003 Pkinase 7.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1727g0003 K02206 - mof:131143523 243.432