Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1727g0001 ATGAGCGGTATCCTTGAACAGACCAATGTATTCAAATCTCTGTTCGTGGGCTGTTTAGAATGCAGAGTTTGGTATCGTCGTTGGAGAAGTTCTAAAGCAGATCTGAATTTAGATCAGTTCAACATCAGGGTCATTGAACCAGTAGGATTCGGTCCGTTCAGGAAGGTTTACCGGTGTCACGATGTAAACAGTAATCGAGTTGTGGCAGTTAAGGAGGTTTACGCTGGTGACGGTAGTGAAACAGAAATGATAAATGAAAGAATCGAGTTTCTTAAAGATCAGCCGCATAACAACGTGGTCAGGTTGCTGTATACATTGAAAAGGGGATGTTACCTCTATCTCGTTTTTGAGTATATCACCCCTAATCTGTACTATTTCATTAACCTATCAGAAGACCTTAGATATCCAAAACAAAGAAATTATATGTTGTATCAGATGCTTGCGGCTGTAGCACACTATCATTCTAACGGGATTCTCCTCCGAGATCTGAAACCACAAAATCTACTCATGGATTTTCGTGATGGTTTCCTCAAGCTATGTGATTTCGGTTTGTACAGTTCATTCGGAGATCCTGAACCTTGTGATATACCAGTGTCCTTGTATACTGCGCCTGAGGTCTTGCTTGATAACAATGAACATTCACGGCCATCTGATCTGTGGGCCGTGGGTTGTATTTTTGGAGAGATAGTAATCAAGAAGCCTCTATTTCATATTGGTAAAAGCAATCAGGATCAGCTAAGGGGCATTTTCGGTTTGTTAGGAACTCCAACTGAGGAATCTTGGCCGGGAATTAGTGACCTGTGCCCTACACTTGCCTTCTACCCCAAGTTCGAACCGCTGAACTTGTCTTCAAAGTTTCCTGATTTGGAACCAGAAGGCGTTGATATTCTTTCGAAGTTGCTTTGTCTGGATCCAAAAAAAAGAATTTCAGCTGAAGCAGCTCTTGACCACGCATTCTTCAATAATGATTTGTGTAAAACACTGATGAGCAAGAGAAAACGGATCCAAGACGTTGCTGAACCTAGAGGTACGAAGAAAATCGAACTTGGGGACAAGAGAAAACCGATCCGAGACGTTGCTGGACCTAGTGGTACAAAGAAAATCGAACTTGGGTACTCCACAGATTAA 1128 0.4211 MSGILEQTNVFKSLFVGCLECRVWYRRWRSSKADLNLDQFNIRVIEPVGFGPFRKVYRCHDVNSNRVVAVKEVYAGDGSETEMINERIEFLKDQPHNNVVRLLYTLKRGCYLYLVFEYITPNLYYFINLSEDLRYPKQRNYMLYQMLAAVAHYHSNGILLRDLKPQNLLMDFRDGFLKLCDFGLYSSFGDPEPCDIPVSLYTAPEVLLDNNEHSRPSDLWAVGCIFGEIVIKKPLFHIGKSNQDQLRGIFGLLGTPTEESWPGISDLCPTLAFYPKFEPLNLSSKFPDLEPEGVDILSKLLCLDPKKRISAEAALDHAFFNNDLCKTLMSKRKRIQDVAEPRGTKKIELGDKRKPIRDVAGPSGTKKIELGYSTD 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1727g0001 375 SMART serkin_6 42 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1727g0001 375 Gene3D Phosphorylase Kinase; domain 1 35 121 - -
Prci1727g0001 375 SUPERFAMILY Protein kinase-like (PK-like) 44 323 IPR011009 -
Prci1727g0001 375 Pfam Protein kinase domain 44 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1727g0001 375 Gene3D Transferase(Phosphotransferase) domain 1 131 348 - -
Prci1727g0001 375 PANTHER CELL DIVISION PROTEIN KINASE 44 321 - -
Prci1727g0001 375 ProSiteProfiles Protein kinase domain profile. 42 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1727g0001 375 FunFam Mitogen-activated protein kinase 122 328 - -
Prci1727g0001 375 MobiDBLite consensus disorder prediction 346 375 - -
Prci1727g0001 375 MobiDBLite consensus disorder prediction 346 360 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1727g0001 37 322 Core Cell Cycle Gene Families AT3G48750 40.878 7.14e-68 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Prci1727g0001 Pkinase 1.7e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1727g0001 K02206 - mof:131143523 237.269