Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1700g0006 ATGGTGGCGTCAAGGGATCAGCGAAATTCCGTCGGCCGTGGGAGGGGGGAGGCTGGACAGCGAACCTTTTCGATTCAGACCATCGGAAAGATCATGAAGAAGGTGTTGCCGCAGAAGGCAAGGATCACTACAGAAGTGAAGGAAACGATCGAACAATGCCTGACGGAGTTCGTCGCCTTCATCACCAGCGAAGCCGCCGAGAAGTGCAACAATGATAACCGCTTTATGCTGACCGGCGACGACATCGTGTGGGCGTTGGCCCGACTCGGATTCGATAATTACGTGGAACCACTCCAGATTTACCTGCACAGGTATAGGGAACCTGATTATGAGGCGGCGAATTGGGCGGAACTGGATACGAGTATTAGCGCCGTTCCGGTATGGCAGCACGGCCAGATCAGCGACGGCGACTATCAGAATGGGATTCTTGGGGTTGGGACTGTTGAGGATTTTCAAGATTTGCCCGCTGTCATTTTGATGAAGATTTATTGA 492 0.5264 MVASRDQRNSVGRGRGEAGQRTFSIQTIGKIMKKVLPQKARITTEVKETIEQCLTEFVAFITSEAAEKCNNDNRFMLTGDDIVWALARLGFDNYVEPLQIYLHRYREPDYEAANWAELDTSISAVPVWQHGQISDGDYQNGILGVGTVEDFQDLPAVILMKIY 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1700g0006 163 PRINTS CCAAT-binding transcription factor subunit A signature 69 87 - -
Prci1700g0006 163 PRINTS CCAAT-binding transcription factor subunit A signature 88 106 - -
Prci1700g0006 163 PRINTS CCAAT-binding transcription factor subunit A signature 50 68 - -
Prci1700g0006 163 Gene3D Histone, subunit A 14 118 IPR009072 GO:0046982
Prci1700g0006 163 SUPERFAMILY Histone-fold 21 109 IPR009072 GO:0046982
Prci1700g0006 163 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 18 111 IPR027113 GO:0001228|GO:0006355|GO:0016602
Prci1700g0006 163 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 23 86 IPR003958 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1700g0006 21 116 CCAAT-HAP3 Transcription Factor Family AT4G14540 45.833 5.82e-32 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Prci1700g0006 CBFD_NFYB_HMF 6.5e-17 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1700g0006 K08065 - sly:101254635 119.783