Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1690g0002 ATGTCCTTCTCTCTCCTCGAAGCGTGTAGGAAGAGAAAGAGATGGCCCAAGGTTTTCAGGTTTCACTCTTTCGCCAACCCTGGTTGCCCCATCAATCCGAACGGACCTTTCAGAGATAACATTCGTCTTTTCCTTCAAGAATGTGGAGAGCTTGAAGACTTCGAGATCCAGGGCATGCCTTTATGGACCACCTTTCTTATTCACGAGAAATCGAACTGTATGACCCCTCTTTACACCATTGAAGAGAATGTCTACCACTCTACGCACCCATTCTGCGACCATTGCCGATGTGCAGGCTGGAGCGGCCATTTTGTATCGAAGAGAAGGTACCATTTTATAATCCCCGACGATAATAAACCGTTGACTGAAGGTTTTCTTGATAATCAGAGTCATCTCTTGCATGGAATAATTCACTGTAATGGGTACGGCCATTTGCTCTGTGTTAATGGCATTGAAGGGGGTTCTAAATTTCTCAGTGGCAGAGAAATCATGGATTTGTGGGACAGGATCTGTACAACTCTTCGAACAAGGAAAATCGCAGTTGAAGATACATCAAAGAAGCGCTTGATGGATCTTCGCCTACTTCATGGAGTTGCTTATGGCCATTCTTGGTTTGGTAGGTGGGGTTACAGATTTTGTCGTGGAAGCTTTGGTGTGAAAGAGCAAAACTATGATGCAGCGATCGAACTTCTAAGTTCGTTAGAGCTTGATGAGGTCGTTCAATGTTTTAGTAATACAATTCGCCATAAAGAAATCAAACAAATAATTCGCCACTATAGAGACATGAGCGAAACCCAGTTGATTACAATCAAGGATCTTCTCAGGTTTATGCTTACCGTCAAGTCTCGGGCACCTCCTCCGCCTAAGAGACTAGTTTTCAATATCACTGTTCCTCCTCCTTCAAACTTCTGCTCAAAAAACTCGACGAGATTTTCAATGTCAAGCAAGCATAACCCGTTAAAGGAAAAATCAGTCAGGTACAAAAAGTTCAGTTCTGCAATGGCTAATATGGACAGTAGGTGGCCTACAAGGCGACTAGAATACGCAGCCCAAGTGATAGTAGATGCATTGAAAGAAAACAAAACAAACAGTTCAGGTTCTGGTGGGATGACGAGGCAGGATGTTAGAGACGCAGCTAGGCTCCACATTGGTGACACAGGCTTGCTGGATTATGTGCTGAAATCACTGAATAATATGATTGTTGGAAACTACGTTGTTCGTCGAATGGTCAACCCGACAACTCGAATCCTAGAGTACAGCATTCATGAGCTGGGAAATGGATCTAAAGCCCCCGAACTACATCGCGAGCTAAAGGTTTTTAATCATATGGAGCCTCCAGCAGAATCAGAACAAGTGCCAGGAATTGATGTTTACAGTGACGTAGCTTTTTTCTACAAGAATGTCCTACTGGGTTACCCAGATTCAGAACAAGTGGACTTGGCGATTCAAACAATTCTAGACAGCAGGCATTTTGTGAAGGAATGGTCATTATTCGATGAAATCGAGCAAGTTTTGACTTTCATATGCCGCTTGATACCCAACTTTGTTGATGATAAACAAGAGTTGAACAAGGAAGTATCCCCAGGTGAGATTGTGCTGGTTCCACTGCATGCAACTGTTGGAGACTTGAAGCAAGCAGCTGAGACTGCTCTAAGGGATACTTATTGTATTGCAGAGAGAGTCATGGTTATAGAGATTGCAGAGTTAGTGGGAATCAGTGATGAGGAAGTGCTTTTTGGGCTAGTGGAGTCTGGTGTGGATCTGCGTGTGAGGGGCATTGGCTTAGATTTGGTTACTCCATTGAAGTATCAGGGAGGTGCAGACAATTGGAAGGTGACATGTGAATGTGGAGCTCAGGATGATGATGGGGAGAGAATGGTGGCATGTGACATTTGTGAGGTGTGGCAGCACACAAGGTGCTGTGGGATTGATGACTCAGAGACGGTGCCACCATTGTTTGTGTGCTCTGGGTGTTGTGACTCACTTGTACCTCCAAGGGTTGATTCTGCATTTAGCAACGATAGCATGGACTGTGCTGATGATTTTTTGATTTCGTCAGAGCCTAATAACTTTCTGGAATTTGGGTATGGCTACTGA 2097 0.4421 MSFSLLEACRKRKRWPKVFRFHSFANPGCPINPNGPFRDNIRLFLQECGELEDFEIQGMPLWTTFLIHEKSNCMTPLYTIEENVYHSTHPFCDHCRCAGWSGHFVSKRRYHFIIPDDNKPLTEGFLDNQSHLLHGIIHCNGYGHLLCVNGIEGGSKFLSGREIMDLWDRICTTLRTRKIAVEDTSKKRLMDLRLLHGVAYGHSWFGRWGYRFCRGSFGVKEQNYDAAIELLSSLELDEVVQCFSNTIRHKEIKQIIRHYRDMSETQLITIKDLLRFMLTVKSRAPPPPKRLVFNITVPPPSNFCSKNSTRFSMSSKHNPLKEKSVRYKKFSSAMANMDSRWPTRRLEYAAQVIVDALKENKTNSSGSGGMTRQDVRDAARLHIGDTGLLDYVLKSLNNMIVGNYVVRRMVNPTTRILEYSIHELGNGSKAPELHRELKVFNHMEPPAESEQVPGIDVYSDVAFFYKNVLLGYPDSEQVDLAIQTILDSRHFVKEWSLFDEIEQVLTFICRLIPNFVDDKQELNKEVSPGEIVLVPLHATVGDLKQAAETALRDTYCIAERVMVIEIAELVGISDEEVLFGLVESGVDLRVRGIGLDLVTPLKYQGGADNWKVTCECGAQDDDGERMVACDICEVWQHTRCCGIDDSETVPPLFVCSGCCDSLVPPRVDSAFSNDSMDCADDFLISSEPNNFLEFGYGY 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1690g0002 698 SMART PHD_3 613 659 IPR001965 -
Prci1690g0002 698 CDD PHD_MMD1_like 614 658 - -
Prci1690g0002 698 PANTHER PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED 12 666 - -
Prci1690g0002 698 SUPERFAMILY FYVE/PHD zinc finger 606 664 IPR011011 -
Prci1690g0002 698 ProSitePatterns Zinc finger PHD-type signature. 614 658 IPR019786 -
Prci1690g0002 698 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 601 662 IPR013083 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1690g0002 10 664 PHD Transcription Factor Family AT5G22260 34.222 3.80e-120 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1690g0002 K26271 - qsa:O6P43_014263 998.423