Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1690g0001 ATGAAAATAGAGGATGCTGGCAGTGTTCTATGTAATGCAGTTGCAAGGGGAGATTCAGATTATCTTAAAAGGCTATTATCTAATGGCATGGATCCTAATACGAAAGATTACGATTACCGAAGCCCTCTTCATGTTGCTGCAGCAGAGGGTTTGTTCTTAATGGCTAAGTTGCTGATAGAAGCTGAAGCTAGCGTTTTTATCAAAGACAGGTGGGGAAATACCCCAATTGATGAAGCTCGGCTGTGTGGAAATAAGATTGATCAAGCTCCTGGAAGAAGCAAAGTCTGCTCAATTGTCAAAATTCCCTCATCTCTCCTCAGAACTTACAGATAA 333 0.4114 MKIEDAGSVLCNAVARGDSDYLKRLLSNGMDPNTKDYDYRSPLHVAAAEGLFLMAKLLIEAEASVFIKDRWGNTPIDEARLCGNKIDQAPGRSKVCSIVKIPSSLLRTYR 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1690g0001 110 Gene3D - 2 86 IPR036770 -
Prci1690g0001 110 Pfam Ankyrin repeats (many copies) 25 79 IPR002110 GO:0005515
Prci1690g0001 110 ProSiteProfiles Ankyrin repeat profile. 5 37 IPR002110 GO:0005515
Prci1690g0001 110 SUPERFAMILY Ankyrin repeat 8 84 IPR036770 -
Prci1690g0001 110 SMART ANK_2a 38 67 IPR002110 GO:0005515
Prci1690g0001 110 SMART ANK_2a 5 34 IPR002110 GO:0005515
Prci1690g0001 110 PANTHER POTASSIUM CHANNEL AKT1 2 85 IPR045319 GO:0005249|GO:0006813
Prci1690g0001 110 ProSiteProfiles Ankyrin repeat profile. 38 70 IPR002110 GO:0005515
Prci1690g0001 110 ProSiteProfiles Ankyrin repeat region circular profile. 38 70 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1690g0001 12 85 Ion Channels AT5G37500 33.333 1.79e-08 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1690g0001 K21867 - pcin:129300667 223.016