Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1688g0004 ATGGCGATGGCTAAAAAACTTTTCCATTTTCGTCATTTCTTCCTCGTCGTCGTCTTCACCTTCTTTCTCGCCATTCACCGTACACATCAGTTACATAATTCTCAGTCTTATGCCCTTCTGAAATTCCAGAAGCTTCTGGGGTATCCATCAGCTCTAAGAAGCTTGAGAACTACGAAAGATTTCTGCAACGTCGAGTCGACCAACTGTTTGACGATAGTCTGCTATGAAGACAATGTAACACAGCTTCATGTTGTTGGTGACAATGGGGTTTCTTATTTGCCTCAAGATTTCACTTCAGACTCTCTATTTGCCACTTTGGGTGCACTCTCGAGCTTGAAAGTTCTTTCTCTGGTTTCTATGGGTCTCTGGGGTCCTATACCTGAAAGCATTTCTCAACTGCCTTCTCTGGAGATTCTTAACATTAGCTCAAATCATTTCAGTGGAGCCATCCCAATCCAGCTTTCTCTGCTGAAGAGTCTGCAATCATTGGTTCTTGATGATAACCACTTTACAGGTACAATTCCCATGTGGGTAGGTTCGCTTCAAGGTTTAGCTGTGTTGAGTATGAGAAAAAATTCTCTTAGTGGCTCTGTGCCAACTTCTGTTAACGATCTTCAGACTCTGAGGGTGCTGGATCTATCAAATAATGATTTACATGGTGAACTACCTGGCCTTAGTAGCTTGAAAAATCTACAAGTTCTTAATTTGGAAAACAACACATTTGGACCCCATTTTCCATCTCTACACACCAAGTTAGTTTCACTTGTAGTTAGAAATAACAGCTTCCGGTTTGGTATACCTTCTAATTTAAGCTCTTCCTACCAGCTTCAAAAGCTGGACCTTTCATTAAATGGATTCGTGGGACCATTTCTACCATCTTTACTCTCTTTGCCTTCCATCAAATACCTTGATGTTTCGGCAAATAAACTTACTGGAACGCTGTTCAGTAATTATTCTTGCAATTCTGATATCCTTTTTGTGAATCTATCTTCAAATCTCTTAAAAGGGGAGCTTCCCAGTTGTTTGAAACCAGAGAACAAGGTGGTTGCATTGTATGACAGAAATTGTTTCTCAAATGAGGATCAAGATCAGCATCCTCCTACCTTCTGTCAAACTGAGGCTCTGGCAGTGAATGTTATGCCCCATGAACAAAAGCAGAGAAGAAGAACAGCTAGTAAAAGAGTTCTTGTGTCAAGCATGGGAGGTATCGTTGGAGGATTCTTGGTTTTTGGAGTGGTTTTCTTGGTTATTGTACGGGTAAACAAAAAAGGATCTGTGAAAGCACCTGCAGGGTCTAAATTGGAGCTAGTTAAAAGCCAGATGAATGACAAACATGATGAGGTTAAAACAACAAGAACTGCACTTTCAGTATTGGAGAATATCATCAGCCGAGTTCCTACGCCTAATAAGGAATTTGTGAAAACGCTTGCAAGATCCATGATGGAGCATGTTGTTAGCCGGGTTCATCATAGACATGTGAGACCTGCAAGGTCCATAGTAGAGCATGTCTCTTCAGTAAACACCGCAAAACTGCTCAGCGATGCAAGGTATATCTCACAGACAATGAAGATGGGTGCCAGCCTTTCTGCTTATAGGACCTTCGCTTCGGATGAACTCAAGGAGGCTACAAATAATTTTGATGCATCATGTTTCATAAGTGAAGGTGCATGTGGTCAGATCTACAAAGGATTGCTCTCTGATGGAACTCATATTGCTGTCAGAAGCTTGAAAATGAAGAAAAGGCATGGCCCTCTGACATATATGCATCACATTGAGTTGATTTCTAAACTTAGGCATCCACACCTGGTCAGTGCTCTAGGACATTGCTTCGAGTGCAGCCATGATGATCCAAGTGTCAGCAATATATATATCATATTTGAGTTTGTACCATACAGAAGTTTACGAGGCTGCATATCTGGATCTTCTGGGGAAAAGCTTTCTTGGGCACAGAGAATAGCAGCTGCAATTGGTGTTATTAGAGGCATTCAGTTTTTGCACACTGGGATGGTGCCTGGACTGTATTCAAATAATCTGAAGATAACAGATATTCTACTGGATAACAATCTCAATGTTAAAATATGCACCTACAATCTTCCTCTATTGACTGATAATAAGATAATGGTAGGCAATGGAACTTTTTCCCCAGTAGTTAAAGGAAATGTTCAAGCAAGGACGAAGGATGGTGAAAAGAATGATGTCTATGATTTTGGCGTAATCTTACTTGAAATCATTCTAGGACGCACAATCATGTTCCATAATGAAGTTGGAACATTAAAAGATCTTTTACAAGTAAGCCTAGCAACTGATGATATAGCTAGAAGGAGCATTGTTGATCCAGCAGTTCACAAGCAATGCTCAGATGAATCATTGAAGAGATTGATGGAGATATGTGTGAGGTGTGTCTCAGAAAATCCTACTGATAGGCCTTCTGTGGAAGATGCTCTCTGGAATTTGCAGTTTGCAGCACAGGTTCAGAATTCATGGGGAAGAGACTCCATTGATGCTAGAGAATCACCTGCTTCACCTTCCCTAGAATAA 2538 0.4082 MAMAKKLFHFRHFFLVVVFTFFLAIHRTHQLHNSQSYALLKFQKLLGYPSALRSLRTTKDFCNVESTNCLTIVCYEDNVTQLHVVGDNGVSYLPQDFTSDSLFATLGALSSLKVLSLVSMGLWGPIPESISQLPSLEILNISSNHFSGAIPIQLSLLKSLQSLVLDDNHFTGTIPMWVGSLQGLAVLSMRKNSLSGSVPTSVNDLQTLRVLDLSNNDLHGELPGLSSLKNLQVLNLENNTFGPHFPSLHTKLVSLVVRNNSFRFGIPSNLSSSYQLQKLDLSLNGFVGPFLPSLLSLPSIKYLDVSANKLTGTLFSNYSCNSDILFVNLSSNLLKGELPSCLKPENKVVALYDRNCFSNEDQDQHPPTFCQTEALAVNVMPHEQKQRRRTASKRVLVSSMGGIVGGFLVFGVVFLVIVRVNKKGSVKAPAGSKLELVKSQMNDKHDEVKTTRTALSVLENIISRVPTPNKEFVKTLARSMMEHVVSRVHHRHVRPARSIVEHVSSVNTAKLLSDARYISQTMKMGASLSAYRTFASDELKEATNNFDASCFISEGACGQIYKGLLSDGTHIAVRSLKMKKRHGPLTYMHHIELISKLRHPHLVSALGHCFECSHDDPSVSNIYIIFEFVPYRSLRGCISGSSGEKLSWAQRIAAAIGVIRGIQFLHTGMVPGLYSNNLKITDILLDNNLNVKICTYNLPLLTDNKIMVGNGTFSPVVKGNVQARTKDGEKNDVYDFGVILLEIILGRTIMFHNEVGTLKDLLQVSLATDDIARRSIVDPAVHKQCSDESLKRLMEICVRCVSENPTDRPSVEDALWNLQFAAQVQNSWGRDSIDARESPASPSLE 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1688g0004 845 Gene3D Ribonuclease Inhibitor 247 360 IPR032675 -
Prci1688g0004 845 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 45 827 - -
Prci1688g0004 845 ProSiteProfiles Leucine-rich repeat profile. 207 229 IPR001611 GO:0005515
Prci1688g0004 845 Gene3D Ribonuclease Inhibitor 32 246 IPR032675 -
Prci1688g0004 845 Pfam Leucine rich repeat 159 218 IPR001611 GO:0005515
Prci1688g0004 845 Pfam Protein tyrosine and serine/threonine kinase 552 813 IPR001245 GO:0004672|GO:0006468
Prci1688g0004 845 SUPERFAMILY Protein kinase-like (PK-like) 526 820 IPR011009 -
Prci1688g0004 845 Gene3D Transferase(Phosphotransferase) domain 1 630 836 - -
Prci1688g0004 845 SUPERFAMILY RNI-like 96 348 - -
Prci1688g0004 845 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 520 628 - -
Prci1688g0004 845 Gene3D Phosphorylase Kinase; domain 1 506 616 - -
Prci1688g0004 845 FunFam Leucine-rich repeat receptor protein kinase EMS1 150 249 - -
Prci1688g0004 845 ProSiteProfiles Protein kinase domain profile. 546 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1688g0004 845 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 629 834 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1688g0004 181 844 Miscellaneous Gene Families AT3G03770 41.558 1.56e-134 418
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Prci1688g0004 PK_Tyr_Ser-Thr 1.1e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1688g0004 - - gmx:100797327 1085.48