LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci1688g0002	ATGGCGATGGCTAAAAAACTTTTCCATTTTCGTCATTTCTTCCTCGTCGTCGTCTTCACCTTCTTTCTCGCCATTCACCGTACACATCAGTTACATAATTCTCAGTCTTATGCCCTTCTGAAATTCCAGAAGCTTCTGGGGTATCCATCAGCTCTAAGAAGCTTGAGAACTACGAAAGATTTCTGCAACGTCGAGTCGACCAACTGTTTGACGATAGTCTGCTATGAAGACAATGTAACACAGCTTCATGTTGTTGGTGACAATGGGGTTTCTTATTTGCCTCAAGATTTCACTTCAGACTCTCTATTTGCCACTTTGGGTGCACTCTCGAGCTTGAAAGTTCTTTCTCTGGTTTCTATGGGTCTCTGGGGTCCTATACCTGAAAGCATTTCTCAACTGCCTTCTCTGGAGATTCTTAACATTAGCTCAAATCATTTCAGTGGAGCCATCCCAATCCAGCTTTCTCTGCTGAAGAGTCTGCAATCATTGGTTCTTGATGATAACCACTTTACAGGTACAATTCCCATGTGGGTAGGTTCGCTTCAAGGTTTAGCTGTGTTGAGTATGAGAAAAAATTCTCTTAGTGGCTCTGTGCCAACTTCTGTTAACGATCTTCAGACTCTGAGGGTGCTGGATCTATCAAATAATGATTTACATGGTGAACTACCTGGCCTTAGTAGCTTGAAAAATCTACAAGTTCTTAATTTGGAAAACAACACATTTGGACCCCATTTTCCATCTCTACACACCAAGTTAGTTTCACTTGTAGTTAGAAATAACAGCTTCCGGTTTGGTATACCTTCTAATTTAAGCTCTTCCTACCAGCTTCAAAAGCTGGACCTTTCATTAAATGGATTCGTGGGACCATTTCTACCATCTTTACTCTCTTTGCCTTCCATCAAATACCTTGATGTTTCGGCAAATAAACTTACTGGAACGCTGTTCAGTAATTATTCTTGCAATTCTGATATCCTTTTTGTGAATCTATCTTCAAATCTCTTAAAAGGGGAGCTTCCCAGTTGTTTGAAACCAGAGAACAAGGTGGTTGCATTGTATGACAGAAATTGTTTCTCAAATGAGGATCAAGATCAGCATCCTCCTACCTTCTGTCAAACTGAGGCTCTGGCAGTGAATGTTATGCCCCATGAACAAAAGCAGAGAAGAAGAACAGCTAGTAAAAGAGTTCTTGTGTCAAGCATGGGAGGTATCGTTGGAGGATTCTTGGTTTTTGGAGTGGTTTTCTTGGTTATTGTACGGGTAAACAAAAAAGGATCTGTGAAAGCACCTGCAGGGTCTAAATTGGAGCTAGTTAAAAGCCAGATGAATGACAAACATGATGAGGTTAAAACAACAAGAACTGCACTTTCAGTATTGGAGAATATCATCAGCCGAGTTCCTACGCCTAATAAGGAATTTGTGAAAACGCTTGCAAGATCCATGATGGAGCATGTTGTTAGCCGGGTTCATCATAGACATGTGAGACCTGCAAGGTCCATAGTAGAGCATGTCTCTTCAGTAAACACCGCAAAACTGCTCAGCGATGCAAGGTATATCTCACAGACAATGAAGATGGGTGCCAGCCTTTCTGCTTATAGGACCTTCGCTTCGGATGAACTCAAGGAGGCTACAAATAATTTTGATGCATCATGTTTCATAAGTGAAGGTGCATGTGGTCAGATCTACAAAGGATTGCTCTCTGATGGAACTCATATTGCTGTCAGAAGCTTGAAAATGAAGAAAAGGCATGGCCCTCTGACATATATGCATCACATTGAGTTGATTTCTAAACTTAGGCATCCACACCTGGTCAGTGCTCTAGGACATTGCTTCGAGTGCAGCCATGATGATCCAAGTGTCAGCAATATATATATCATATTTGAGTTTGTACCATACAGAAGTTTACGAGGCTGCATATCTGGATCTTCTGGGGAAAAGCTTTCTTGGGCACAGAGAATAGCAGCTGCAATTGGTGTTATTAGAGGCATTCAGTTTTTGCACACTGGGATGGTGCCTGGACTGTATTCAAATAATCTGAAGATAACAGATATTCTACTGGATAACAATCTCAATGTTAAAATATGCACCTACAATCTTCCTCTATTGACTGATAATAAGATAATGCTTTCAGGTAGGCAATGGAACTTTTTCCCCAGTAGTTAA	2160	0.4093	MAMAKKLFHFRHFFLVVVFTFFLAIHRTHQLHNSQSYALLKFQKLLGYPSALRSLRTTKDFCNVESTNCLTIVCYEDNVTQLHVVGDNGVSYLPQDFTSDSLFATLGALSSLKVLSLVSMGLWGPIPESISQLPSLEILNISSNHFSGAIPIQLSLLKSLQSLVLDDNHFTGTIPMWVGSLQGLAVLSMRKNSLSGSVPTSVNDLQTLRVLDLSNNDLHGELPGLSSLKNLQVLNLENNTFGPHFPSLHTKLVSLVVRNNSFRFGIPSNLSSSYQLQKLDLSLNGFVGPFLPSLLSLPSIKYLDVSANKLTGTLFSNYSCNSDILFVNLSSNLLKGELPSCLKPENKVVALYDRNCFSNEDQDQHPPTFCQTEALAVNVMPHEQKQRRRTASKRVLVSSMGGIVGGFLVFGVVFLVIVRVNKKGSVKAPAGSKLELVKSQMNDKHDEVKTTRTALSVLENIISRVPTPNKEFVKTLARSMMEHVVSRVHHRHVRPARSIVEHVSSVNTAKLLSDARYISQTMKMGASLSAYRTFASDELKEATNNFDASCFISEGACGQIYKGLLSDGTHIAVRSLKMKKRHGPLTYMHHIELISKLRHPHLVSALGHCFECSHDDPSVSNIYIIFEFVPYRSLRGCISGSSGEKLSWAQRIAAAIGVIRGIQFLHTGMVPGLYSNNLKITDILLDNNLNVKICTYNLPLLTDNKIMLSGRQWNFFPSS	719

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci1688g0002	719	Gene3D	Phosphorylase Kinase; domain 1	506	616	-	-
	Prci1688g0002	719	Gene3D	Transferase(Phosphotransferase) domain 1	630	708	-	-
	Prci1688g0002	719	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED	45	703	-	-
	Prci1688g0002	719	FunFam	Putative inactive leucine-rich repeat receptor-like protein kinase	520	628	-	-
	Prci1688g0002	719	ProSiteProfiles	Leucine-rich repeat profile.	207	229	IPR001611	GO:0005515
	Prci1688g0002	719	Pfam	Protein tyrosine and serine/threonine kinase	552	699	IPR001245	GO:0004672\|GO:0006468
	Prci1688g0002	719	Gene3D	Ribonuclease Inhibitor	247	360	IPR032675	-
	Prci1688g0002	719	SMART	tyrkin_6	546	716	IPR020635	GO:0004713\|GO:0006468
	Prci1688g0002	719	FunFam	Leucine-rich repeat receptor protein kinase EMS1	150	248	-	-
	Prci1688g0002	719	SUPERFAMILY	L domain-like	38	352	-	-
	Prci1688g0002	719	Gene3D	Ribonuclease Inhibitor	32	246	IPR032675	-
	Prci1688g0002	719	SUPERFAMILY	Protein kinase-like (PK-like)	526	703	IPR011009	-
	Prci1688g0002	719	ProSiteProfiles	Protein kinase domain profile.	546	719	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci1688g0002	719	Pfam	Leucine rich repeat	159	218	IPR001611	GO:0005515

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci1688g0002	181	703	Miscellaneous Gene Families	AT3G03770	39.234	7.06e-84	280

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-VI-1	Prci1688g0002		PK_Tyr_Ser-Thr	9.4e-14	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci1688g0002	-		-	gmx:100797327	878.241