Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1679g0001 ATGAAGCTCTGTTATGAGCAAGAGCTAATTCTGATAAATATTTCATTTTTCCTTCTTTCGGTTCTTCATTCTTCTTGTCTCTCCCTTGATAGTATATCCCCAAGCCAATCACTCAGAGATGGTGACATTTTGCTCTCCGACAGTGGAATTTTCGCCTTCGGTTTCTTCACCCCCGGAAATAATTCTTCAACGAAGCGGTACGTTGGCATATGGTATCATAAATTCTCCAACCAAGCCGTTGTGTGGGTGGCTAATAGACAAAATCCTATTAATGATACTTCTGGAGTTTTGTCTATTGATACTCATGGAAACATTGTTCTCCTTCACAATGATATATATTCGAACCAAACTCCTATTTGGTCTTCCAACATTTCAAACACATCTTCTAGTGACTCCTTTGCTAAGCTTCAAGACTCAGGAAACTTGGTTTTGATAACAAGAAATGGTGGAATAACGAAAGTTCTGTGGCAGAGTTTTGATTATCCCAGTGACACTTTGCTTCCGTTCATGAAAATCGGAGTGGATCGGAGAACCGGTTTCAATAGGTTCCTCACGTCATGGAAATCCCCAGATGACCCAGGGTTGGGGAACGTGAGCCATAGGATCGACCCAACAGGCTATCCTCAGTCATTCATATATAGAAACGGTGCTCCATTTTGGCGGGGCGGGTCTTGGACGGGTCAAGGATTGAGTGGTGTACCTGAAATGATACCAAACTTCAATTTCCAAGTAAGATTTATTGAAAATGCTGGCGAAGTTGTCATGATGACGCAACTCATGGAACCTTCCATGTTCTTAAGAATGGTGCTTGACAACATGGGCCATGAGACATGGACTATTTGGCAACCTAATGGGCCCGTGAACCCGCAAGAGTGGAACATGAGAAACGGGTCGAGTGGGTGTGTGAGGAAGAAGAACATGTCCATGTGTCAAAGTGGGGATGGGTTTGTGAAGGTGGCAAGTGTGAAGGTTCCAGATACGTCAAAAGCACGTGTGAATAAGAGTGAGACTATGAGCTTAAAAGGGTGTGAAGAGATGTGCTTAAGGGATTGTTCTTGTGTAGCATATACGAGTGCAGATGTGGTCTCACAAAGTGGGTGCTTGACGTGGCATGCTGATATGGAAGATATTAGGACTTACCAAGGCCAAGGACAAGATTTATACGTGCATGTGGATGCATCTGAATTAGGAAAATATGAAAGTAAGCCTTATGGTTCTCTTGGAAAGAAGGGGATGGTGACACTCGTAGTCGTTTCTACGTGCCTGATACTCTTGGTTATTGTTTTTGCGTATTGGTTTGTATGGAACAAGAAACGAGTACAAAGTAGGCATATCGAACATGTTTTTGCTGGACATCAGAACAATAATTCAGATTTACCATTATTTGATCTAAGTGACATAATAGCAGCAACAGACAATTTCTCAGAGACTAACAAGCTTGGACAAGACGGTTTTGGTTCTGTTTATAAGGGTCTACTCAATGATGAAAAGACAATAGCAGTGAAGAGGCTGTCAAAGTATTCTGGACAAGGCATTGAAGAATTCAAAAATGAGGTTTCTATAATTGCAAAGCTCCAACATAGAAATCTTGTCAAGATTTTAGGTTATTGCATACATGGAGAAGAGAAGATGTTGATCTATGAATATTTGCCAAACAAAACCTTGGACTCTTTTCCTTTTGATCAAGCAAAAAAGGTACTCTTAGATTGGACGAAAAGATTTGATATCATTTGTGGAGTTGTCAGAGGAATGTTATACCTTCATCAAGATTCAAGATTAAGAATAATTCATCGAGACTTAAAAACCAGCAATATCTTGTTAGATTCTACATTGAATCCAAAAATTGCAGATTTTGGTATGGCTAAAACGTTTGGTGGAGATCAAATTGAAGGAAACACAAACCGCATCGTGGGAACCTAG 1920 0.4057 MKLCYEQELILINISFFLLSVLHSSCLSLDSISPSQSLRDGDILLSDSGIFAFGFFTPGNNSSTKRYVGIWYHKFSNQAVVWVANRQNPINDTSGVLSIDTHGNIVLLHNDIYSNQTPIWSSNISNTSSSDSFAKLQDSGNLVLITRNGGITKVLWQSFDYPSDTLLPFMKIGVDRRTGFNRFLTSWKSPDDPGLGNVSHRIDPTGYPQSFIYRNGAPFWRGGSWTGQGLSGVPEMIPNFNFQVRFIENAGEVVMMTQLMEPSMFLRMVLDNMGHETWTIWQPNGPVNPQEWNMRNGSSGCVRKKNMSMCQSGDGFVKVASVKVPDTSKARVNKSETMSLKGCEEMCLRDCSCVAYTSADVVSQSGCLTWHADMEDIRTYQGQGQDLYVHVDASELGKYESKPYGSLGKKGMVTLVVVSTCLILLVIVFAYWFVWNKKRVQSRHIEHVFAGHQNNNSDLPLFDLSDIIAATDNFSETNKLGQDGFGSVYKGLLNDEKTIAVKRLSKYSGQGIEEFKNEVSIIAKLQHRNLVKILGYCIHGEEKMLIYEYLPNKTLDSFPFDQAKKVLLDWTKRFDIICGVVRGMLYLHQDSRLRIIHRDLKTSNILLDSTLNPKIADFGMAKTFGGDQIEGNTNRIVGT 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1679g0001 639 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 439 549 - -
Prci1679g0001 639 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 193 IPR036426 -
Prci1679g0001 639 Pfam D-mannose binding lectin 80 188 IPR001480 -
Prci1679g0001 639 ProSiteProfiles Bulb-type lectin domain profile. 29 157 IPR001480 -
Prci1679g0001 639 CDD PAN_AP_plant 310 389 - -
Prci1679g0001 639 Gene3D Transferase(Phosphotransferase) domain 1 550 639 - -
Prci1679g0001 639 SMART serkin_6 474 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1679g0001 639 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 24 159 - -
Prci1679g0001 639 SMART blect_4 35 162 IPR001480 -
Prci1679g0001 639 CDD B_lectin 35 162 IPR001480 -
Prci1679g0001 639 Pfam S-locus glycoprotein domain 220 294 IPR000858 GO:0048544
Prci1679g0001 639 Gene3D Phosphorylase Kinase; domain 1 435 549 - -
Prci1679g0001 639 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 550 639 - -
Prci1679g0001 639 Gene3D - 27 159 IPR036426 -
Prci1679g0001 639 SUPERFAMILY Protein kinase-like (PK-like) 457 639 IPR011009 -
Prci1679g0001 639 ProSiteProfiles PAN/Apple domain profile. 310 392 IPR003609 -
Prci1679g0001 639 Pfam Protein kinase domain 475 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1679g0001 639 Pfam PAN-like domain 310 377 IPR003609 -
Prci1679g0001 639 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 17 629 - -
Prci1679g0001 639 ProSiteProfiles Protein kinase domain profile. 474 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1679g0001 639 ProSitePatterns Serine/Threonine protein kinases active-site signature. 595 607 IPR008271 GO:0004672|GO:0006468
Prci1679g0001 639 SMART ntp_6 311 391 IPR003609 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1679g0001 411 639 Receptor kinase-like Gene Family AT4G23190 53.043 1.79e-75 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci1679g0001 Pkinase 3.7e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1679g0001 - - pcin:129286401 1200.65