Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1671g0001 ATGGCTCCTTTTAGGTCTCACGTCTCTACAAAGAGCAAAGTGATGAAGCCATGGGAAGCCAACACAAATTTGCCGATCCGCAAGGGAGCTTGGACTCAAGAAGAAGATTCAAAACTAGCTCAGGCTATTGCTGTTCATGGACCTCAAAGGTGGAACTTCATTGCTGCCAAAGCAGGTGTCAAAAGGAGTAGCAAGAGTTGCAGGCTAAGGTGGTTGAATTACCTGCGCCCAAATATCAAGAGAGGAAACATATCAGACCAAGAAGAGGATTTGATACTTCGTCTTCATAAACTCCTCGGAAACAGGTGGTCCTTAATTGCGGGAAGACTACCAGGACGAACAGATAATGAAATAAAAAATTATTGGAACTCTCATTTGTGCAAGAAGGTGAAGAAGCAGAGAGAGAAGCAAATTGGCCTGTGCCCAGAAAGAGAAGAAGATAAACAAGAAGTGATCATTGTGGAAGAAATTAAGGTTCATATTTCTGATGAGGAAGAAGAGAGAACAAGAGGCGAGAATTCAAATAACGAGGAAGGTCATGAAGAAGAAGAAGAGTCATCATCAAAGCTTGATTTTGATGTGGACGAGTTCTTCAATTTCTCCGAAGAGGACTCATCACTGAATTTGGAGTGGCTTAGCAAATTCCTTAATGATGATTCAACATAG 666 0.4174 MAPFRSHVSTKSKVMKPWEANTNLPIRKGAWTQEEDSKLAQAIAVHGPQRWNFIAAKAGVKRSSKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLCKKVKKQREKQIGLCPEREEDKQEVIIVEEIKVHISDEEEERTRGENSNNEEGHEEEEESSSKLDFDVDEFFNFSEEDSSLNLEWLSKFLNDDST 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1671g0001 221 SUPERFAMILY Homeodomain-like 25 122 IPR009057 -
Prci1671g0001 221 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 76 130 IPR017930 -
Prci1671g0001 221 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 25 182 - -
Prci1671g0001 221 ProSiteProfiles Myb-like domain profile. 23 75 IPR001005 -
Prci1671g0001 221 FunFam Myb transcription factor 28 80 - -
Prci1671g0001 221 MobiDBLite consensus disorder prediction 163 191 - -
Prci1671g0001 221 Pfam Myb-like DNA-binding domain 28 75 IPR001005 -
Prci1671g0001 221 Pfam Myb-like DNA-binding domain 81 126 IPR001005 -
Prci1671g0001 221 ProSiteProfiles Myb-like domain profile. 76 126 IPR001005 -
Prci1671g0001 221 SMART sant 80 128 IPR001005 -
Prci1671g0001 221 SMART sant 27 77 IPR001005 -
Prci1671g0001 221 CDD SANT 30 75 IPR001005 -
Prci1671g0001 221 Gene3D - 28 80 - -
Prci1671g0001 221 CDD SANT 85 126 IPR001005 -
Prci1671g0001 221 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 26 75 IPR017930 -
Prci1671g0001 221 Gene3D - 84 158 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1671g0001 27 130 MYB Transcription Factor Family AT5G40330 67.308 1.32e-49 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci1671g0001 Myb_DNA-binding 3e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1671g0001 K09422 - cave:132188282 234.572