Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1660g0006 ATGGAAGGAAGTGTCTCTTTAAGAAAATTGCTGGAATTTGAGGAAGCGCCATCAAAGACGTGTGATAATAACACCCAAGAAACCCCCATTGACAATACTATGGGGTGCAATTTTCTCAGTTTGAGCCTGAATATATCAGAAAAAGATCTCCAAAATCAAGAGAAGCCATTGACCAACGTCGGTTCGCTGAGAATTAAGCTAGAGGAAGCAAAGAAAGAGAATCAGAATTTAAGAGCTATGCTAAACCAGATTACTGAACATTACACTTCTCTTCAGAATCTCCTTCTGGCTTTGCAGAAGGAGCAGAAGCAGCGATCATCACCACCACCTCCAAATTATCAAGATTTTCTGAATAGAGCAGATCATGTCATGGTGATGGAGAAATCAGCTTTGCCACTTGAGGGTGATCATCATATGAGTAGCCAAGTAACACTGGAAGGAGCAAAAAGAACAACAGATCAAACATTTGAGGCATCTTGCAGGAAGGCTAGAGTTTCCATAAGGGCACATTCAGATTTTTCTCGGATAGGTGATGGGTGTCAATGGAGAAAGTATGGGCAAAAGACAGCTAAGAATAACCCTAGTCCCCGAGCTTATTACCGTTGCAGCATGGGAAATGCATGTCCCGTTCGTAAGCAGTTCATATTGTTACAGGTTCAAAGGTGTGCTAAGGATGATACTGTATTCATTAACACTTATGAAGGGAGCCATAATCATCCACTACCTCGAGCAGCTAGACCCATGGCAAGTATGACATCAGCAGCATTGAGCATGCTACTTTCAGGCTCAACAACTAGTCCTGCACATAATTCAGGTCTCTTCCCCTTATTATCTGACTTGGCTTCCTTCTCTGCATCTTCATCATGTCCTACAATGACACTGGACTTGGCCATCCCCTCTAAGAACAACTCTATGAACTTGCGATGGCCTACCTCATCACTGAACCAGTGCGAACCATTTCCTTTCTCATTGCATGGCTCTGCTCAACAATCTGAGAGACTGAAATTGTTTCATAAGCCTCTGACCACAATGGCGCCTGTGAAAAATCTTTACTTGGAGAATTTAGTTGGCACGGCTATAGCCGAAGATCCTTCTTTCAAAGAAGCATTTGTTACAGCAATATCTTCATTCACTGGAGCAACTCAAAATCTTAACGGCCACAATGAACTAAGTAAAAGTGGGCATGGCCCTTCTTCTAAGATACCCTCACCGCTGCATCAGTCCTGCACCACTGGATTGATTTGA 1245 0.4297 MEGSVSLRKLLEFEEAPSKTCDNNTQETPIDNTMGCNFLSLSLNISEKDLQNQEKPLTNVGSLRIKLEEAKKENQNLRAMLNQITEHYTSLQNLLLALQKEQKQRSSPPPPNYQDFLNRADHVMVMEKSALPLEGDHHMSSQVTLEGAKRTTDQTFEASCRKARVSIRAHSDFSRIGDGCQWRKYGQKTAKNNPSPRAYYRCSMGNACPVRKQFILLQVQRCAKDDTVFINTYEGSHNHPLPRAARPMASMTSAALSMLLSGSTTSPAHNSGLFPLLSDLASFSASSSCPTMTLDLAIPSKNNSMNLRWPTSSLNQCEPFPFSLHGSAQQSERLKLFHKPLTTMAPVKNLYLENLVGTAIAEDPSFKEAFVTAISSFTGATQNLNGHNELSKSGHGPSSKIPSPLHQSCTTGLI 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1660g0006 414 SMART WRKY_cls 176 241 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci1660g0006 414 SUPERFAMILY WRKY DNA-binding domain 170 242 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci1660g0006 414 Coils Coil 60 101 - -
Prci1660g0006 414 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 48 387 IPR044810 GO:0003700
Prci1660g0006 414 Pfam WRKY DNA -binding domain 178 240 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci1660g0006 414 Gene3D WRKY domain 160 243 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci1660g0006 414 MobiDBLite consensus disorder prediction 385 414 - -
Prci1660g0006 414 ProSiteProfiles WRKY domain profile. 171 242 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1660g0006 63 296 WRKY Transcription Factor Family AT4G04450 39.739 3.70e-53 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci1660g0006 WRKY 5.5e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1660g0006 - - pcin:129300593 797.349