Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1660g0005 ATGGAAGGAAGTGTCTCTTTAAGAAAATTGCTGGAATTTGAGGAAGCGCCATCAAAGACGTGTGATAATAACACCCAAGAAACCCCCATTGACAATACTATGGGGTGCAATTTTCTCAGTTTGAGCCTGAATATATCAGAAAAAGATCTCCAAAATCAAGAGAAGCCATTGACCAACGTCGGTTCGCTGAGAATTAAGCTAGAGGAAGCAAAGAAAGAGAATCAGAATTTAAGAGCTATGCTAAACCAGATTACTGAACATTACACTTCTCTTCAGAATCTCCTTCTGGCTTTGCAGAAGGAGCAGAAGCAGCGATCATCACCACCACCTCCAAATTATCAAGATTTTCTGAAGCAGAATAGAGCAGATCATGTCATGGTGATGGAGAAATCAGCTTTGCCACTTGAGGGTGATCATCATATGAGTAGCCAAGTAACACTGGAAGGAGCAAAAAGAACAACAGATCAAACATTTGAGGCATCTTGCAGGAAGGCTAGAGTTTCCATAAGGGCACATTCAGATTTTTCTCGGATAGGTGATGGGTGTCAATGGAGAAAGTATGGGCAAAAGACAGCTAAGAATAACCCTAGTCCCCGAGCTTATTACCGTTGCAGCATGGGAAATGCATGTCCCGTTCGTAAGCAGGTTCAAAGGTGTGCTAAGGATGATACTGTATTCATTAACACTTATGAAGGGAGCCATAATCATCCACTACCTCGAGCAGCTAGACCCATGGCAAGTATGACATCAGCAGCATTGAGCATGCTACTTTCAGGCTCAACAACTAGTCCTGCACATAATTCAGGTCTCTTCCCCTTATTATCTGACTTGGCTTCCTTCTCTGCATCTTCATCATGTCCTACAATGACACTGGACTTGGCCATCCCCTCTAAGAACAACTCTATGAACTTGCGATGGCCTACCTCATCACTGAACCAGTGCGAACCATTTCCTTTCTCATTGCATGGCTCTGCTCAACAATCTGAGAGACTGAAATTGTTTCATAAGCCTCTGACCACAATGGCGCCTGTGAAAAATCTTTACTTGGAGAATTTAGTTGGCACGGCTATAGCCGAAGATCCTTCTTTCAAAGAAGCATTTGTTACAGCAATATCTTCATTCACTGGAGCAACTCAAAATCTTAACGGCCACAATGAACTAAGTAAAAGTGGGCATGGCCCTTCTTCTAAGATACCCTCACCGCTGCATCAGTCCTGCACCACTGGATTGATTTGA 1236 0.432 MEGSVSLRKLLEFEEAPSKTCDNNTQETPIDNTMGCNFLSLSLNISEKDLQNQEKPLTNVGSLRIKLEEAKKENQNLRAMLNQITEHYTSLQNLLLALQKEQKQRSSPPPPNYQDFLKQNRADHVMVMEKSALPLEGDHHMSSQVTLEGAKRTTDQTFEASCRKARVSIRAHSDFSRIGDGCQWRKYGQKTAKNNPSPRAYYRCSMGNACPVRKQVQRCAKDDTVFINTYEGSHNHPLPRAARPMASMTSAALSMLLSGSTTSPAHNSGLFPLLSDLASFSASSSCPTMTLDLAIPSKNNSMNLRWPTSSLNQCEPFPFSLHGSAQQSERLKLFHKPLTTMAPVKNLYLENLVGTAIAEDPSFKEAFVTAISSFTGATQNLNGHNELSKSGHGPSSKIPSPLHQSCTTGLI 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1660g0005 411 SMART WRKY_cls 178 238 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci1660g0005 411 Gene3D WRKY domain 162 240 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci1660g0005 411 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 48 384 IPR044810 GO:0003700
Prci1660g0005 411 MobiDBLite consensus disorder prediction 382 411 - -
Prci1660g0005 411 Coils Coil 60 101 - -
Prci1660g0005 411 ProSiteProfiles WRKY domain profile. 173 239 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci1660g0005 411 SUPERFAMILY WRKY DNA-binding domain 172 239 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci1660g0005 411 Pfam WRKY DNA -binding domain 180 237 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1660g0005 63 293 WRKY Transcription Factor Family AT4G04450 39.344 1.63e-55 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci1660g0005 WRKY 9.1e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1660g0005 - - pcin:129300593 791.186