Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1660g0004 ATGGAAGGAAGTGTCTCTTTAAGAAAATTGCTGGAATTTGAGGAAGCGCCATCAAAGACGTGTGATAATAACACCCAAGAAACCCCCATTGACAATACTATGGGGTGCAATTTTCTCAGTTTGAGCCTGAATATATCAGAAAAAGATCTCCAAAATCAAGAGAAGCCATTGACCAACGTCGGTTCGCTGAGAATTAAGCTAGAGGAAGCAAAGAAAGAGAATCAGAATTTAAGAGCTATGCTAAACCAGATTACTGAACATTACACTTCTCTTCAGAATCTCCTTCTGGCTTTGCAGAAGGAGCAGAAGCAGCGATCATCACCACCACCTCCAAATTATCAAGATTTTCTGAAGCAGAATAGAGCAGATCATGTCATGGTGATGGAGAAATCAGCTTTGCCACTTGAGGGTGATCATCATATGAGTAGCCAAGTAACACTGGAAGGAGCAAAAAGAACAACAGATCAAACATTTGAGGCATCTTGCAGGAAGGCTAGAGTTTCCATAAGGGCACATTCAGATTTTTCTCGGATAGGTGATGGGTGTCAATGGAGAAAGTATGGGCAAAAGACAGCTAAGAATAACCCTAGTCCCCGAGCTTATTACCGTTGCAGCATGGGAAATGCATGTCCCGTTCGTAAGCAGTTCATATTGTTACAGGTTCAAAGGTGTGCTAAGGATGATACTGTATTCATTAACACTTATGAAGGGAGCCATAATCATCCACTACCTCGAGCAGCTAGACCCATGGCAAGTATGACATCAGCAGCATTGAGCATGCTACTTTCAGGCTCAACAACTAGTCCTGCACATAATTCAGGTCTCTTCCCCTTATTATCTGACTTGGCTTCCTTCTCTGCATCTTCATCATGTCCTACAATGACACTGGACTTGGCCATCCCCTCTAAGAACAACTCTATGAACTTGCGATGGCCTACCTCATCACTGAACCAGTGCGAACCATTTCCTTTCTCATTGCATGGCTCTGCTCAACAATCTGAGAGACTGAAATTGTTTCATAAGCCTCTGACCACAATGGCGCCTGTGAAAAATCTTTACTTGGAGAATTTAGTTGGCACGGCTATAGCCGAAGATCCTTCTTTCAAAGAAGCATTTGTTACAGCAATATCTTCATTCACTGGAGCAACTCAAAATCTTAACGGCCACAATGAACTAAGTAAAAGTGGGCATGGCCCTTCTTCTAAGATACCCTCACCGCTGCATCAGTCCTGCACCACTGGATTGATTTGA 1251 0.4301 MEGSVSLRKLLEFEEAPSKTCDNNTQETPIDNTMGCNFLSLSLNISEKDLQNQEKPLTNVGSLRIKLEEAKKENQNLRAMLNQITEHYTSLQNLLLALQKEQKQRSSPPPPNYQDFLKQNRADHVMVMEKSALPLEGDHHMSSQVTLEGAKRTTDQTFEASCRKARVSIRAHSDFSRIGDGCQWRKYGQKTAKNNPSPRAYYRCSMGNACPVRKQFILLQVQRCAKDDTVFINTYEGSHNHPLPRAARPMASMTSAALSMLLSGSTTSPAHNSGLFPLLSDLASFSASSSCPTMTLDLAIPSKNNSMNLRWPTSSLNQCEPFPFSLHGSAQQSERLKLFHKPLTTMAPVKNLYLENLVGTAIAEDPSFKEAFVTAISSFTGATQNLNGHNELSKSGHGPSSKIPSPLHQSCTTGLI 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1660g0004 416 SUPERFAMILY WRKY DNA-binding domain 172 244 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci1660g0004 416 SMART WRKY_cls 178 243 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci1660g0004 416 Coils Coil 60 101 - -
Prci1660g0004 416 Gene3D WRKY domain 162 245 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci1660g0004 416 ProSiteProfiles WRKY domain profile. 173 244 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci1660g0004 416 Pfam WRKY DNA -binding domain 180 242 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci1660g0004 416 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 48 389 IPR044810 GO:0003700
Prci1660g0004 416 MobiDBLite consensus disorder prediction 387 416 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1660g0004 63 298 WRKY Transcription Factor Family AT4G04450 38.710 4.02e-53 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci1660g0004 WRKY 5.5e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1660g0004 - - pcin:129300593 806.208