Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1656g0001 ATGAACAGGGCTACTAGCAAAGGATACTGGAAAGCCACTGGGAATGACCGTCCAGTGAGGCATGAACAAAGGACTGTGGGGCTGAAAAAAACTTTGGTATTTCATAGTGGGAGGGCTCCAGATGGTAAGCGTACCAATTGGGTTATGCATGAGTACAGGCTTGTTGATGAAGAGCTGGAAAGAGCTGGAATTGGGTCCACCCAGGATGCATACGTTTTGTGTAGAGTATTTCACAAAAATAACATAGGACCTCCAAATGGTCAACGTTATGCACCTTTCATTGAGGAAGAATGGGATGATTCATCAGCACTGATTCCAGGGGCAGAGCCTGTTAATGAAGCTACAGCCATCCGTCGTCCACTCATTGAAGGCAATGGTCATGTTGGCTGTTTTGAAGGAACTAATGGTGTCCAGGATACCCAATCCATCAATAAAGCTCCTCTTGATGTGAATAAGCTACCAATTGAAACTCAAAATCTGCTAGCTGTCTGCAAGAGGGAGAGCATGGCTGAGTATCCGTCACCCGAAAGGGATAATTCTAAAACTATGGATGAGTACCCATCACCACAAACCGATAATCCGAAGCCATTCTCGCTAATATACAAAAGAAGGCGGCATAATTTGAACACTAGTCATTCAAATGCTCCTGAGCATTCAGCCCGTAACAGCCAGGATCCATGTTCATCGATAATAACAACCGCAGCAACAACACTTCCAGCTACAACCACCACAACAACTGCCAGTGCTTCGACGAGAAAACATTTCTTGTCTGCGTTGGTGGAGTTCTCTCTACTTGAATCTCTTGAACCCAAGGAAAGTCCTTCGACTCGCGTGCCACAATTTGACCCCTCTACTCTTGACGCTCCTGTGCCTCCTAGCTGCTTGAAATTCATCCAACAGTTGCAGGATGAGGTTCGTAAACTCTCGGTTGAGAGGGAGACAATGAAATTTGAGATTATGAGTGCTCAGGCCATGATAAACATCCTGCAATCGCGTATCGATGCGCTGAACAAAGAGAATGAGGAGTTGAAGAGAGGCAATTAG 1044 0.4559 MNRATSKGYWKATGNDRPVRHEQRTVGLKKTLVFHSGRAPDGKRTNWVMHEYRLVDEELERAGIGSTQDAYVLCRVFHKNNIGPPNGQRYAPFIEEEWDDSSALIPGAEPVNEATAIRRPLIEGNGHVGCFEGTNGVQDTQSINKAPLDVNKLPIETQNLLAVCKRESMAEYPSPERDNSKTMDEYPSPQTDNPKPFSLIYKRRRHNLNTSHSNAPEHSARNSQDPCSSIITTAATTLPATTTTTTASASTRKHFLSALVEFSLLESLEPKESPSTRVPQFDPSTLDAPVPPSCLKFIQQLQDEVRKLSVERETMKFEIMSAQAMINILQSRIDALNKENEELKRGN 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1656g0001 347 Gene3D NAC domain 1 82 IPR036093 GO:0003677|GO:0006355
Prci1656g0001 347 Pfam No apical meristem (NAM) protein 2 54 IPR003441 GO:0003677|GO:0006355
Prci1656g0001 347 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 2 211 - -
Prci1656g0001 347 SUPERFAMILY NAC domain 2 80 IPR036093 GO:0003677|GO:0006355
Prci1656g0001 347 MobiDBLite consensus disorder prediction 166 197 - -
Prci1656g0001 347 ProSiteProfiles NAC domain profile. 1 79 IPR003441 GO:0003677|GO:0006355
Prci1656g0001 347 Coils Coil 298 346 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1656g0001 1 347 NAC Transcription Factor Family AT3G10490 43.947 7.87e-82 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci1656g0001 NAM 6.5e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1656g0001 - - pcin:129300582 681.019