Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1648g0007 ATGCCTTACCTTGTCCGAGAGAAATTATTTATTGGTGATATCAGTGACGCTGCGGAGATCCTTCAAAATGGTAGCGATGAAATCACGCATATCTTATCGGTCCTTAGCTCTGCTTCAATATCATTCTTTTCCGAGTGGCGAAGTAGCCTAACGATCCCGGCAAAGGAAATTAAGAAGGTATATGTGGGTGGTGGTCACGGTGGTGCTTCTGATGATGACTTGGGTGATATATCAAGAAGTCCGTTGTCACTGGAAAGCCTTCTGTACTCGTTGGAATATGCAGGTAAGGATCTGAAGTTGGTGAGGATGGCTGTTCCTCTGAGGGATACGGAAAATGAAGATTTATTGGATTACTTGGATGTTTGCGTCAATTTTATTGATCGAAGTAGGAAAGATGGTTCTGTTTTGGTGCACTGCTTTGCTGGAGTATCAAGAAGTGCAGCAATCATTACAGCATATCTGATGAGATCTGAACATCTATCTCAAGAAGATGCCCTTCAATCATTAAGGAAGAGCTGTGAATTCGTTTGCCCCAATGACGGTTTTCTAGAGCAGTTAAAAATGTATGAGGAGATGGGCTTTAAGGTGGATCGCTCTAGCTCTATATACAGGCGCTTTCGTTTGAGAGTATTGGGTCAGAATTATAACTCGGGTGTGAGAGTAGACGGTTCTAAACTTGGAGCTGATCCTGGCATACCTGTCAGTGTTTCTTCAGAGGTAGGAGCTCCAAGAGCAGAAAATAATTGTAGTCCTACATATCGCTGCAGGAAGTGCCGACGTGTAGTTGCATTGAAGGACCATGTTGTAGACCATGTTCCAGGTGAAGGGGAGACATCCAGCGAGTGGCATAAGTGGAGAAGTGACAGCCTCTATAACAAATGTAATGAATCTGAGTGTTCTTCTATATTTATTGAGCCACTACAGTGGATGAAAGCAGTTGAGGAAGGTGCATCGGAGGGGAAGTTGAGCTGTGCCCACTGTGACGCTCGCTTGGGAAACTTCAATTGGTTTGGCATACAATGCAGCTGTGGAAGCTGGATAACCCCTGCCTTTCAGATCCACAAGTGCCGAGTGGATAGAAGCCCTGTCTAA 1092 0.4469 MPYLVREKLFIGDISDAAEILQNGSDEITHILSVLSSASISFFSEWRSSLTIPAKEIKKVYVGGGHGGASDDDLGDISRSPLSLESLLYSLEYAGKDLKLVRMAVPLRDTENEDLLDYLDVCVNFIDRSRKDGSVLVHCFAGVSRSAAIITAYLMRSEHLSQEDALQSLRKSCEFVCPNDGFLEQLKMYEEMGFKVDRSSSIYRRFRLRVLGQNYNSGVRVDGSKLGADPGIPVSVSSEVGAPRAENNCSPTYRCRKCRRVVALKDHVVDHVPGEGETSSEWHKWRSDSLYNKCNESECSSIFIEPLQWMKAVEEGASEGKLSCAHCDARLGNFNWFGIQCSCGSWITPAFQIHKCRVDRSPV 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1648g0007 363 PIRSF DUSP12 3 46 IPR016278 GO:0006470|GO:0008138
Prci1648g0007 363 PIRSF DUSP12 77 363 IPR016278 GO:0006470|GO:0008138
Prci1648g0007 363 ProSiteProfiles Dual specificity protein phosphatase domain profile. 1 195 IPR020422 GO:0006470|GO:0008138
Prci1648g0007 363 Gene3D Protein tyrosine phosphatase superfamily 4 212 IPR029021 -
Prci1648g0007 363 FunFam Dual specificity protein phosphatase 12-like 4 212 - -
Prci1648g0007 363 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 116 171 IPR000387 GO:0016311|GO:0016791
Prci1648g0007 363 ProSitePatterns Tyrosine specific protein phosphatases active site. 137 147 IPR016130 GO:0016311|GO:0016791
Prci1648g0007 363 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 12 FAMILY MEMBER 1 360 - -
Prci1648g0007 363 Pfam Dual specificity phosphatase, catalytic domain 99 191 IPR000340 GO:0008138|GO:0016311
Prci1648g0007 363 CDD DSP_DUSP12 4 197 - -
Prci1648g0007 363 SMART dsp_5 1 192 IPR020422 GO:0006470|GO:0008138
Prci1648g0007 363 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 5 195 IPR029021 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1648g0007 100 191 Protein tyrosine phosphatase (PTP) family AT3G06110 37.634 2.07e-15 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1648g0007 K14819 - qsa:O6P43_010054 549.666