Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1648g0006 ATGCCTTACCTTGTCCGAGAGAAATTATTTATTGGTGATATCAGTGACGCTGCGGAGATCCTTCAAAATGGTAGCGATGAAATCACGCATATCTTATCGGTCCTTAGCTCTGCTTCAATATCATTCTTTTCCGAGTGGCGAAGTAGCCTAACGATCCCGGCAAAGGAAATTAAGAAGGTATATGTGGGTGGTGGTCACGGTGGTGCTTCTGATGATGACTTGGGTGATATATCAAGAAGTCCGTTGTCACTGGAAAGCCTTCTGTACTCGTTGGAATATGCAGGTAAGGATCTGAAGTTGGTGAGGATGGCTGTTCCTCTGAGGGATACGGAAAATGAAGATTTATTGGATTACTTGGATGTTTGCGTCAATTTTATTGATCGAAGTAGGAAAGATGGTTCTGTTTTGGTGCACTGCTTTGCTGGAGTATCAAGAAGTGCAGCAATCATTACAGCATATCTGATGAGATCTGAACATCTATCTCAAGAAGATGCCCTTCAATCATTAAGGAAGAGCTGTGAATTCGTTTGCCCCAATGACGGTTTTCTAGAGCAGTTAAAAATGTATGAGGAGATGGGCTTTAAGGTGGATCGCTCTAGCTCTATATACAGGCGCTTTCGTTTGAGAGTATTGGGTCAGAATTATAACTCGGGTGTGAGAGTAGACGGTTCTAAACTTGGAGCTGATCCTGGCATACCTGTCAGTGTTTCTTCAGAGGTAGGAGCTCCAAGAGCAGAAAATAATTGTAGTCCTACATATCGCTGCAGGAAGTGCCGACGTGTAGTTGCATTGAAGGACCATGTTGTAGACCATGTTCCAGGTGAAGGGGAGACATCCAGCGAGTGGCATAAGTGGAGAAGTGACAGCCTCTATAACAAATTTGAGGAAGGTGCATCGGAGGGGAAGTTGAGCTGTGCCCACTGTGACGCTCGCTTGGGAAACTTCAATTGGTTTGGCATACAATGCAGCTGTGGAAGCTGGATAACCCCTGCCTTTCAGATCCACAAGTGCCGAGTGGATAGAAGCCCTGTCTAA 1035 0.4512 MPYLVREKLFIGDISDAAEILQNGSDEITHILSVLSSASISFFSEWRSSLTIPAKEIKKVYVGGGHGGASDDDLGDISRSPLSLESLLYSLEYAGKDLKLVRMAVPLRDTENEDLLDYLDVCVNFIDRSRKDGSVLVHCFAGVSRSAAIITAYLMRSEHLSQEDALQSLRKSCEFVCPNDGFLEQLKMYEEMGFKVDRSSSIYRRFRLRVLGQNYNSGVRVDGSKLGADPGIPVSVSSEVGAPRAENNCSPTYRCRKCRRVVALKDHVVDHVPGEGETSSEWHKWRSDSLYNKFEEGASEGKLSCAHCDARLGNFNWFGIQCSCGSWITPAFQIHKCRVDRSPV 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1648g0006 344 ProSiteProfiles Dual specificity protein phosphatase domain profile. 1 195 IPR020422 GO:0006470|GO:0008138
Prci1648g0006 344 PIRSF DUSP12 3 46 IPR016278 GO:0006470|GO:0008138
Prci1648g0006 344 PIRSF DUSP12 77 298 IPR016278 GO:0006470|GO:0008138
Prci1648g0006 344 PIRSF DUSP12 290 344 IPR016278 GO:0006470|GO:0008138
Prci1648g0006 344 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 12 FAMILY MEMBER 1 341 - -
Prci1648g0006 344 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 116 171 IPR000387 GO:0016311|GO:0016791
Prci1648g0006 344 ProSitePatterns Tyrosine specific protein phosphatases active site. 137 147 IPR016130 GO:0016311|GO:0016791
Prci1648g0006 344 Pfam Dual specificity phosphatase, catalytic domain 99 191 IPR000340 GO:0008138|GO:0016311
Prci1648g0006 344 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 5 195 IPR029021 -
Prci1648g0006 344 FunFam Dual specificity protein phosphatase 12-like 4 212 - -
Prci1648g0006 344 CDD DSP_DUSP12 4 197 - -
Prci1648g0006 344 SMART dsp_5 1 192 IPR020422 GO:0006470|GO:0008138
Prci1648g0006 344 Gene3D Protein tyrosine phosphatase superfamily 4 212 IPR029021 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1648g0006 100 191 Protein tyrosine phosphatase (PTP) family AT3G06110 37.634 2.07e-15 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1648g0006 K14819 - qsa:O6P43_010054 508.064