Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1624g0001 ATGGGTAACATAGGAAGTAGCGGCGCTAACGGCCGTCGGAGAAGCAATAGTAGACGGAGGCATCCGCCGCCGACGTCGCCGCCACCGTTCAGGACGCAGCCAGAAATCGCGTCCAGTCGGTCTGTGCATCCAGCATCTACACCTCACACATCGCAATACCCGAACCCTTCCCCGTATTTCCAGTACCCAGGTCACTATTCCGCTCCCCATCAGGCTATGCCGGCGCCGTTGCCGGCTCCTCTCGATCACCACCATCGAGCGGGGCCTCATCCACAAACGGACCCATCACGGACGGGTGTAAGTTACCATTGCGGGCCTGCTGCGCCTCCACCCGCACCATATGTAGAGCATCAGAAGGCGGTTACCATAAGGAACGATGTTAATGTCAAGAAGGGTACTCTAAGGGTTGAACCTGATGAGGAAAATCCTGGGCGGTCCCTTGTTGCTTTCACATTTGATGCCACCGTAGATGGCAGCATTACCATCCTTTTCTTTGGTAAAGAAGATGAAAGCTGCATCCTTACACCAACGAAGCAAAATATTTTAGCCCCTGTAACTGTAAGTTTCCAGCAAGGTCTTGGCCAGCAGTTTAGGCAGCCAACTGGAACTGGTATTGACTTTTCAATATTTGAGGAATCAGAATTATCAGAAGTGGGTGCAGTAGATGTGTTCCCTCTAGCAGTGAAGGCAGAAGCATCCTATGGTAAACAAGATGAATCGAATGAAAACTTAGCATCTGATAGCAGAAACTCTCAGATAACTCTAGCAGCGTTTGAGAAGGAGAAAGGAGAATTCCGGGTAAAAGTAGTTAAGCAGATCCTATGGATAAATGAAATGAGGTATGAACTGCAAGAGATATATGGTATTGGAAATTCAGTGGAGAGTGACTTGGACGAAAATGATTCTGGAAAGGAGTGTGTCATCTGCCTCTCAGAGCCACGAGACACAACTGTTCTTCCCTGCCGACACATGTGCATGTGTAGTGGGTGTGCAAAGGTTTTGAGGTTTCAGACAAATAGATGCCCAATTTGCAGACAGCCAGTTGAGAGGCTTTTGGAGATAAAGGGCCATTATGATAGCCAACCCGAGGAATGA 1095 0.4895 MGNIGSSGANGRRRSNSRRRHPPPTSPPPFRTQPEIASSRSVHPASTPHTSQYPNPSPYFQYPGHYSAPHQAMPAPLPAPLDHHHRAGPHPQTDPSRTGVSYHCGPAAPPPAPYVEHQKAVTIRNDVNVKKGTLRVEPDEENPGRSLVAFTFDATVDGSITILFFGKEDESCILTPTKQNILAPVTVSFQQGLGQQFRQPTGTGIDFSIFEESELSEVGAVDVFPLAVKAEASYGKQDESNENLASDSRNSQITLAAFEKEKGEFRVKVVKQILWINEMRYELQEIYGIGNSVESDLDENDSGKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVERLLEIKGHYDSQPEE 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1624g0001 364 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 289 354 IPR013083 -
Prci1624g0001 364 FunFam probable E3 ubiquitin-protein ligase LOG2 290 355 - -
Prci1624g0001 364 SMART ring_2 306 344 IPR001841 -
Prci1624g0001 364 ProSiteProfiles Zinc finger RING-type profile. 306 345 IPR001841 -
Prci1624g0001 364 MobiDBLite consensus disorder prediction 1 113 - -
Prci1624g0001 364 MobiDBLite consensus disorder prediction 32 58 - -
Prci1624g0001 364 Pfam Zinc finger, C3HC4 type (RING finger) 304 350 - -
Prci1624g0001 364 PANTHER MAHOGUNIN 1 356 IPR045194 GO:0061630
Prci1624g0001 364 CDD mRING-HC-C3HC5_MGRN1-like 304 345 IPR045195 -
Prci1624g0001 364 SUPERFAMILY RING/U-box 305 351 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1624g0001 103 325 C3H Transcription Factor Family AT3G09770 62.009 3.21e-95 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1624g0001 - - jre:108989075 468.774