Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1623g0001 ATGGCGAAAAATCCTGATTGTTCAGATTCAGACCCACTCAGGTGGGGGGAGGCAGCAGATTCACACAAGGGAAGTCACTTGGAGGAAGTGAGAGCCATGGTGGCCGACTACCAGAGGGCCACCGTACATCTAAGTGGCACGAGGCGGCTGTCGATTTCGCAGGTGGCGGCGGTGGCTAATCGGAGCTCCGATGTCGTGAAGGTGGTGCTATCGGAGTCGGCTAGGGCCGGCGTGAAGGCGAGCAGTGATTGGATAATTGAAAGCGTCAAGAGTGGGACTCCAATTTATGGTGTGACTACAGGCTTTGGTGCTTCTTCTAACAAGCGAACTGACCAAGTCGCTGCTCTTCAAAAGGAGATGGTCAGATTCTTAAACTGTGCAATATTCGACAAGGGAAAAGATATATGGCACACTCTGCCTCAAGCAGCAAGCAGAGCAGCGATGCTTGTGAGAGTGAACACATTGCTTCAAGGCTACTCAGGCATTCGATTTGAGATCTTAGAAGCTATCACCAAACTTCTCAACCACAACGTCACTCCTTGTTTGCCTCTCCGTGGCACCGTTACCGCTTCCGGCGATCTCATCCCTCTTTCTTATATTCTCTCTCTCCTTGTTGGTCGCCCTAATTCCCAAGCCATTGGACCTTCCGGAGAGTTTCTCACTCCCAAGCAAGCTTTCCTTCTTGCCGGCATCAATACTAACCACAACGCAGGCATTAATACTAATAAATCATCAAGTGATGAGAGAGATACAGTCAGGTTCTTTGAATTGCAGCCAAAGGAAGGCCTTGCTCTTGTGAATGGCACAGCCGTTGGTTCTGGATTGGCTTCCATGGTGCTTTTTGAGGCAAATATTTTAGCTTTATTGTCAGAAGTTTCATCCGCCGTTTTTGCTGAAGTAATGCATGCGAAACCAGAATTCACTCACCAAATGATTCACAATCTCAAGCACCATCCTGGTCAGATTGAAGCTGCTGCAATTATGGAACACATTTTAGATGGAAGCTCTTATGTGAATGATCAATCCCTTAGATCACAAAAGCCTAAGAAGGAACGATATGCTCTTATTACTTCTCCTCAATGGCTAGGTCCACAGATTGAAGTCATCAGATATTCCACAAAGTCCATTGAAAGAGAGATAAACTCTGTGAACGACAATCCTTTGATTGTCGTTTCACATAACAAGGCTTTCCATGGTGGTAATTTCCAAGGCACGCCCATTGGAGTTTCCATGGATAACGTGCGTTTAGCTGTAGCTTCCATCGGCAAGCTCGTCTTTGCACAGTTCACTGAACTCGTAAACGACATGTACAACAACGGGTTGCCATCTAATCTCTCTGCTTCTAGAAACCCTAGTTTGGATTATGGTTTTAAAGCATCTGAAGTTGCAATGGCTTCTTACTGTTCTGAACTTCAGTTCTTGGCAAATCCAGTGACGAGTCATGTTCAAAGTGCAGAACATCACAACCAAGATGTGAACTCTTTGGGTTTGATTTCTGCGAGAAAAACTAGTGAGGCTGTTGGGATCTTGAAGCTCATGTGCTCAACTTATTTGGCTGCACTATGTCAAGCCATTGATCTGAGACACTTGGAAGAAATCTTCATTGTTACAGTCAAAAACACTATAAGCCGAGTTACAAAGAAGACAAACCCATTTTGTGATGAAGAAGATTTACTCAAAGTGGTTGATAATGAGTATGTCTTTTCCTACATTGACGATCCCTTCAATGCTTCATACCCCTTGATGCCAAAACTTAAACAAGTTCTTTATGAGAAAGCACACAAGAACGCTGTGAAAGAGAGGAACAATAACAGTGCTGCAGTATTTGAGAAAATTGAGTATTTTGAGAATGAGTTGAGGCTTGTTTTGCCGAAGGAAATTGAAAGAGCAAGGGTTGGTTATGAGAATGGTGAACCAGAGATTCCAAATAGAATTAAGGAGTGTAGGTCATACCCACTATACAAGTTTGTGAGGGAAGATTTAAAGACTGGGTTGCTTACTGGGGAAAAGATCAAGTCACCAGATGAGGACTTTGATAAAGTGTTCAAGGCAATTTGTGATGCAAGGATTGTTGATCCAATTTTGGAGTGCCTTGCAGATTGGAAAGGAGTTCCGATTTCAATGTGA 2127 0.4405 MAKNPDCSDSDPLRWGEAADSHKGSHLEEVRAMVADYQRATVHLSGTRRLSISQVAAVANRSSDVVKVVLSESARAGVKASSDWIIESVKSGTPIYGVTTGFGASSNKRTDQVAALQKEMVRFLNCAIFDKGKDIWHTLPQAASRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNVTPCLPLRGTVTASGDLIPLSYILSLLVGRPNSQAIGPSGEFLTPKQAFLLAGINTNHNAGINTNKSSSDERDTVRFFELQPKEGLALVNGTAVGSGLASMVLFEANILALLSEVSSAVFAEVMHAKPEFTHQMIHNLKHHPGQIEAAAIMEHILDGSSYVNDQSLRSQKPKKERYALITSPQWLGPQIEVIRYSTKSIEREINSVNDNPLIVVSHNKAFHGGNFQGTPIGVSMDNVRLAVASIGKLVFAQFTELVNDMYNNGLPSNLSASRNPSLDYGFKASEVAMASYCSELQFLANPVTSHVQSAEHHNQDVNSLGLISARKTSEAVGILKLMCSTYLAALCQAIDLRHLEEIFIVTVKNTISRVTKKTNPFCDEEDLLKVVDNEYVFSYIDDPFNASYPLMPKLKQVLYEKAHKNAVKERNNNSAAVFEKIEYFENELRLVLPKEIERARVGYENGEPEIPNRIKECRSYPLYKFVREDLKTGLLTGEKIKSPDEDFDKVFKAICDARIVDPILECLADWKGVPISM 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1623g0001 708 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 186 202 IPR022313 GO:0016841
Prci1623g0001 708 FunFam Phenylalanine ammonia-lyase 2 269 - -
Prci1623g0001 708 MobiDBLite consensus disorder prediction 1 22 - -
Prci1623g0001 708 CDD PAL-HAL 48 528 IPR001106 -
Prci1623g0001 708 Gene3D Fumarase/aspartase (Central domain) 270 703 - -
Prci1623g0001 708 PANTHER HISTIDINE AMMONIA-LYASE 9 707 IPR001106 -
Prci1623g0001 708 Gene3D - 531 643 IPR023144 -
Prci1623g0001 708 SUPERFAMILY L-aspartase-like 11 706 IPR008948 GO:0003824
Prci1623g0001 708 Gene3D - 2 269 IPR024083 -
Prci1623g0001 708 Pfam Aromatic amino acid lyase 50 529 IPR001106 -
Prci1623g0001 708 NCBIfam phenylalanine ammonia-lyase 11 698 IPR005922 GO:0005737|GO:0006559|GO:0016841
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1623g0001 3 706 Monolignol Biosynthesis Gene Families AT2G37040 66.111 0.0 964
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1623g0001 K10775 - gmx:100787872 1001.12