Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1619g0002 ATGGCACCAAGAAAAGGCCATTTGATCAGAGAACTTCATGCTTCCAAGGAGACGTGGACCATTGTTGTAAGGGTTGTAAGGAAATGGAATGTTACTCCTAAAAACAAGCCTTTAGAGGTATTTTGTATCAACATGATTCTCATTGATGAAGAGGGTGAGAGGATACAAGCAAGTGTTACACAAAAGCCTCTTCTTGAACGTTTCAGAGATAGGGCTGTTGAGGGAAGTACTGTATTCATAGCCAATTTCAATGTAGTAGAGAATAACCAGTACAAAGCAACAAATCACACTTACAAGATCATTTTTAATGCAAACACTTTCATAGATGAAGAGAAAGCAAACATACCATGGAACTCTTTCTCTTTTATGCCTATTAGTGTTTGCCTTGAGCAAGAGATTGCACCTGAATACTTGATTGATGTTATTGGAGTGTTAAAGTCCATAGGAAAGCTTGAAGAGTACAGGACCGAAAATGGATTCCAAAACAAGCTGACTTTAACATTGGCAGATCAAAATGGCACAAGTATTGTATGTGTGCTTCTTGGAGAGTGTGCCTCAAATACCTATTATAGCTATCTTGACAATGAAAGGTTTCCATTAGTGTTTGTCATTCAACTGTGCCGACTTACTATAGACAACAAGGAGGTCCAGATTGGTTCATCCTTCAATGCAACAAAAGTGTGGATGAATCCAAATATTAAGGAAGTTTCAGATTTGATCGACAGTGCCAAGGAAAGCTCATCTCCAAACAACTCTTGCTTCAGCCAAGTTATACCAATTCAAACTACACAACTCTCTGCAAACTCTATGTTGAGATCCACTAAGAAGATTATGATTTCTGACATCGACACAATGAAAGTGGGTGATCCATTTATTATAGAGTGTGTAATAGAGAAATTAGAGACTAATCCAGGCTGGACATATGAGGGTTGTATCAGATGTGGAACCAAACATAGGCCTAATTCAAAAGGAATTATGGTTTGCCCTTCATGCCCCAATGATATGACTCAAACTGAATTTAAGCTCAAAGCACACTATAACGTGTCTGATGAATCTGGAAATACCTCTGTTGTCTTTTTTGACAAGCATGCGTATGAGTTCACTCTAAAAACTGCTTCTGAGATAAAAGAGCAGCTGCATAAAGAAAATCGTTCATATGCCTTCCCAGATGAGCTTGAAGATGTGGTAGGGAGAAAAATGCTGCTCAAGCTAAAGCGTACAAGCTACAATCTTGAACATCCTAACTCTAGCATTGGTGTGGTTCAATACACAGCATGTCAAGACCTTCTTGAGCAATTTAAAGAGGCTTCAGTAGAGGAGGGTACCAATTCAGGTCTGGCTATTATGGTCTTAGAGGGTACTATAGTTAAAGAGGGAGTGAATGAGGTGGTTCCAACAGCCTCAGACTTTAAGAATAGTCATGAAGAATCAACTATGGGTTCATCTCTTTCCAAAGTTGAACCAATAATGTCTCAGGACATTGGGCTTGATGAAATGACTATATCTCAGCTGTATCCTCCTCCATTGCCAAGAGGAAAGAGGAAGCAATATTTGAAAAAGAGTGCAGAAGTCCAGCAAATTAATCCCCAACCTCAACCATCTACTTATGCCATGCCTAACACCAAGCCTGTCAAGATAATTAAACAAGAAAAACCTTGA 1659 0.3906 MAPRKGHLIRELHASKETWTIVVRVVRKWNVTPKNKPLEVFCINMILIDEEGERIQASVTQKPLLERFRDRAVEGSTVFIANFNVVENNQYKATNHTYKIIFNANTFIDEEKANIPWNSFSFMPISVCLEQEIAPEYLIDVIGVLKSIGKLEEYRTENGFQNKLTLTLADQNGTSIVCVLLGECASNTYYSYLDNERFPLVFVIQLCRLTIDNKEVQIGSSFNATKVWMNPNIKEVSDLIDSAKESSSPNNSCFSQVIPIQTTQLSANSMLRSTKKIMISDIDTMKVGDPFIIECVIEKLETNPGWTYEGCIRCGTKHRPNSKGIMVCPSCPNDMTQTEFKLKAHYNVSDESGNTSVVFFDKHAYEFTLKTASEIKEQLHKENRSYAFPDELEDVVGRKMLLKLKRTSYNLEHPNSSIGVVQYTACQDLLEQFKEASVEEGTNSGLAIMVLEGTIVKEGVNEVVPTASDFKNSHEESTMGSSLSKVEPIMSQDIGLDEMTISQLYPPPLPRGKRKQYLKKSAEVQQINPQPQPSTYAMPNTKPVKIIKQEKP 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1619g0002 552 Gene3D - 4 110 IPR012340 -
Prci1619g0002 552 Gene3D - 113 251 IPR012340 -
Prci1619g0002 552 SUPERFAMILY Nucleic acid-binding proteins 7 108 IPR012340 -
Prci1619g0002 552 SUPERFAMILY Nucleic acid-binding proteins 120 244 IPR012340 -
Prci1619g0002 552 PANTHER OS03G0429900 PROTEIN 7 411 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Prci1619g0002 552 MobiDBLite consensus disorder prediction 505 552 - -
Prci1619g0002 552 CDD RPA1_DBD_A_like 20 108 - -
Prci1619g0002 552 Pfam Replication factor-A C terminal domain 291 410 IPR013955 -
Prci1619g0002 552 Pfam Domain of unknown function DUF223 45 138 IPR003871 -
Prci1619g0002 552 MobiDBLite consensus disorder prediction 521 539 - -
Prci1619g0002 552 CDD RPA1_DBD_B_like 140 242 - -
Prci1619g0002 552 Gene3D - 261 435 IPR012340 -
Prci1619g0002 552 SUPERFAMILY Nucleic acid-binding proteins 277 410 IPR012340 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1619g0002 4 412 Core DNA Replication Machinery Family AT5G08020 25.635 2.45e-19 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1619g0002 - - pcin:129300509 1109.36